dbCAN Logo

PROTEIN: HRGMv2_4534_1_61

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4534_1_61.pdb
Genome ID:
HRGMv2_4534
Protein ID:
HRGMv2_4534_1_61

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MLMDYNQALR   QKTIGPRKTL   VKKGTLDIGI   VETTPVVWKE   RLYRFEWIRD   NAGGAGYWNN 60
QEGTAYFRFT   DMETEESTPA   FGHGYAFGSA   YVDLEGGKAY   AFGVHGGGGG   HRLDVFWSSD 120
MERWESAVAL   DFPTEWQLYN   TSVCKGRGEY   ILAVEIGGPK   EVGGEGFTVV   FAKSPDLIHW 180
ELMPAADHIY   TRERYSACPV   IRYAAGGYYM   IYLESMPCHR   WMPYIVRTKD   FVHFELGLRN 240
PVMCFDDEDK   KIQRPEKYTE   EQIAYILNSI   DCNNSDVDIC   EFQGKTVILY   SWGNQYGKEF 300
LAQAEYDGSM   EEFLTSFFE 319
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P9WLW7-F1-model_v4 17 308 1 299 0.7129 0.7712
AF-A0A132Z9M4-F1-model_v4 18 318 2 311 0.6762 0.7359
AF-A0A0H3GMN3-F1-model_v4 19 318 1 307 0.6751 0.734
AF-A0A175VW90-F1-model_v4 17 318 19 322 0.6623 0.722
AF-A0A175WBK6-F1-model_v4 14 308 24 327 0.6596 0.7388
AF-Q59PS7-F1-model_v4 14 312 22 342 0.6583 0.7419
AF-A0A175VX88-F1-model_v4 21 318 22 307 0.6554 0.7488
AF-A0A1C1CKJ4-F1-model_v4 14 312 30 342 0.6509 0.7343
AF-A0A1C1CEU0-F1-model_v4 22 318 1 318 0.6486 0.7191
AF-A0A0D2GZK6-F1-model_v4 21 318 1 321 0.6477 0.7193
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-D1JFC5-F1-model_v4 GH130 18 318 1 293 0.6989 0.7511
AF-A0A7G9YT45-F1-model_v4 GH130 17 319 1 295 0.6984 0.7487
AF-A0A7Z7BXG1-F1-model_v4 GH43_32 11 319 1 304 0.6981 0.7497
QXD27352.1 GH0 13 312 35 347 0.698 0.7873
AF-D1JGY6-F1-model_v4 GH130 17 318 1 293 0.6978 0.7504
AF-A0A0X1KR75-F1-model_v4 GH130 16 319 1 293 0.6955 0.7483
AF-A0A1Y1CFI9-F1-model_v4 GH117 12 316 20 350 0.695 0.7776
AF-F2NLZ0-F1-model_v4 GH130 16 319 1 291 0.6924 0.7493
AF-A0A7S7SIN5-F1-model_v4 GH0 12 319 30 321 0.6919 0.7741
AF-A0A7G9Z0H0-F1-model_v4 GH130 17 319 1 294 0.6912 0.7497
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A8J8MPU7 GH117 14 312 1 336 0.7031 0.7904
A0A1Y1CL06 GH117 6 319 23 345 0.6986 0.756
A0A4P6PFL2 GH117 6 307 12 347 0.6971 0.7827
A0A1B1Y5T7 GH117 6 312 21 347 0.6967 0.7713
D5EQ86 GH117 16 315 6 346 0.6948 0.7844
A0A6P1THQ1 GH43_33 20 318 2 297 0.6925 0.7506
A0A7G9Z0H0 GH130 17 319 1 294 0.6912 0.7497
D5EL79 GH117 9 312 10 354 0.6911 0.7783
C5CFL0 GH130 14 319 1 294 0.6904 0.7418
H1XWJ5 GH130 17 319 1 301 0.6885 0.7367
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4qqs-assembly1.cif.gz_A 21 318 2 297 0.6929 0.7562
3qz4-assembly2.cif.gz_B 22 318 1 300 0.6908 0.7445
5muj-assembly1.cif.gz_A 3 307 1 338 0.6861 0.7706
4o8n-assembly1.cif.gz_A 13 308 2 302 0.6849 0.7383
5mui-assembly1.cif.gz_A 3 307 1 338 0.6841 0.7686
1uv4-assembly1.cif.gz_A 21 318 1 290 0.6838 0.7379
3wn1-assembly1.cif.gz_A 14 308 5 302 0.6807 0.7358
4nov-assembly1.cif.gz_A 22 318 5 294 0.6805 0.7504
6f1j-assembly1.cif.gz_A 14 307 4 301 0.6794 0.7359
4n2z-assembly1.cif.gz_A 12 319 1 318 0.6791 0.7216
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P9WLW6-F1-model_v4 17 308 1 299 0.7133 0.7713
AF-P9WLW7-F1-model_v4 17 308 1 299 0.7129 0.7712
AF-B0K2C3-F1-model_v4 14 318 1 302 0.6732 0.7154
AF-Q5AUM3-F1-model_v4 18 318 16 319 0.6682 0.7257
AF-Q2U1X8-F1-model_v4 17 318 16 316 0.6678 0.7236
AF-B8NMD3-F1-model_v4 17 318 16 316 0.6677 0.7235
AF-A1D5W1-F1-model_v4 15 318 16 320 0.666 0.719
AF-Q8A8Y4-F1-model_v4 16 319 16 318 0.6654 0.7257
AF-A1CLG4-F1-model_v4 16 318 17 320 0.6649 0.7193
AF-A1DKY5-F1-model_v4 17 318 17 320 0.664 0.7218
Download Full SwissProt Results