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Cluster: HRGMv2_4525_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4525_3 HRGMv2_4525_3_110 128831 129871 + GH109
STP HRGMv2_4525_3 HRGMv2_4525_3_111 130024 131349 + SBP_bac_1
TC HRGMv2_4525_3 HRGMv2_4525_3_112 131561 132505 + 3.A.1.1.11
TC HRGMv2_4525_3 HRGMv2_4525_3_113 132518 133378 + 3.A.1.1.11
peptidase HRGMv2_4525_3 HRGMv2_4525_3_114 133461 134855 + S12.UPW
pfam HRGMv2_4525_3 HRGMv2_4525_3_115 134948 135829 + AP_endonuc_2
CAZyme HRGMv2_4525_3 HRGMv2_4525_3_116 135826 137016 + CE9
pfam HRGMv2_4525_3 HRGMv2_4525_3_117 137021 137779 + Glucosamine_iso
CAZyme HRGMv2_4525_3 HRGMv2_4525_3_118 137779 139671 + GH20
Gene ID: HRGMv2_4525_3_110
Type: CAZyme
Location: 128831 - 129871 (+)
Gene ID: HRGMv2_4525_3_111
Type: STP
Location: 130024 - 131349 (+)
Gene ID: HRGMv2_4525_3_112
Type: TC
Location: 131561 - 132505 (+)
Gene ID: HRGMv2_4525_3_113
Type: TC
Location: 132518 - 133378 (+)
Gene ID: HRGMv2_4525_3_114
Type: peptidase
Location: 133461 - 134855 (+)
Gene ID: HRGMv2_4525_3_115
Type: pfam
Location: 134948 - 135829 (+)
Gene ID: HRGMv2_4525_3_116
Type: CAZyme
Location: 135826 - 137016 (+)
Gene ID: HRGMv2_4525_3_117
Type: pfam
Location: 137021 - 137779 (+)
Gene ID: HRGMv2_4525_3_118
Type: CAZyme
Location: 137779 - 139671 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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