Cluster: HRGMv2_4525_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4525_2 | HRGMv2_4525_2_108 | 126530 | 129634 | - | GH38 |
| STP | HRGMv2_4525_2 | HRGMv2_4525_2_109 | 129904 | 131637 | + | HATPase_c |
| TF | HRGMv2_4525_2 | HRGMv2_4525_2_110 | 131672 | 132700 | + | HTH_AraC |
| TC | HRGMv2_4525_2 | HRGMv2_4525_2_111 | 132888 | 134219 | + | 3.A.1.1.40 |
| TC | HRGMv2_4525_2 | HRGMv2_4525_2_112 | 134372 | 135295 | + | 3.A.1.1.11 |
| TC | HRGMv2_4525_2 | HRGMv2_4525_2_113 | 135297 | 136163 | + | 3.A.1.1.11 |
Gene ID: HRGMv2_4525_2_108
Type: CAZyme
Location: 126530 - 129634 (-)
Type: CAZyme
Location: 126530 - 129634 (-)
Gene ID: HRGMv2_4525_2_109
Type: STP
Location: 129904 - 131637 (+)
Type: STP
Location: 129904 - 131637 (+)
Gene ID: HRGMv2_4525_2_110
Type: TF
Location: 131672 - 132700 (+)
Type: TF
Location: 131672 - 132700 (+)
Gene ID: HRGMv2_4525_2_111
Type: TC
Location: 132888 - 134219 (+)
Type: TC
Location: 132888 - 134219 (+)
Gene ID: HRGMv2_4525_2_112
Type: TC
Location: 134372 - 135295 (+)
Type: TC
Location: 134372 - 135295 (+)
Gene ID: HRGMv2_4525_2_113
Type: TC
Location: 135297 - 136163 (+)
Type: TC
Location: 135297 - 136163 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4525_2_111 | vegan > vegetarian | 1.87606 | 0.02760 |