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Cluster: HRGMv2_4525_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4525_2 HRGMv2_4525_2_59 67943 68695 - 2.A.79.1.4
CAZyme HRGMv2_4525_2 HRGMv2_4525_2_60 68714 70933 - GH36
TC HRGMv2_4525_2 HRGMv2_4525_2_61 71009 72763 - 9.B.33.1.1
TF HRGMv2_4525_2 HRGMv2_4525_2_62 72824 73570 + HTH_AraC
TC HRGMv2_4525_2 HRGMv2_4525_2_63 73837 75162 + 3.A.1.1.11
TC HRGMv2_4525_2 HRGMv2_4525_2_64 75234 76121 + 3.A.1.1.11
TC HRGMv2_4525_2 HRGMv2_4525_2_65 76123 77013 + 3.A.1.1.11
CAZyme HRGMv2_4525_2 HRGMv2_4525_2_66 77021 79489 + GH2
pfam HRGMv2_4525_2 HRGMv2_4525_2_67 79505 80572 + ADH_zinc_N | ADH_N
STP HRGMv2_4525_2 HRGMv2_4525_2_68 80576 81763 + Aminotran_1_2
CAZyme HRGMv2_4525_2 HRGMv2_4525_2_69 81800 82951 + GH177
Gene ID: HRGMv2_4525_2_59
Type: TC
Location: 67943 - 68695 (-)
Gene ID: HRGMv2_4525_2_60
Type: CAZyme
Location: 68714 - 70933 (-)
Gene ID: HRGMv2_4525_2_61
Type: TC
Location: 71009 - 72763 (-)
Gene ID: HRGMv2_4525_2_62
Type: TF
Location: 72824 - 73570 (+)
Gene ID: HRGMv2_4525_2_63
Type: TC
Location: 73837 - 75162 (+)
Gene ID: HRGMv2_4525_2_64
Type: TC
Location: 75234 - 76121 (+)
Gene ID: HRGMv2_4525_2_65
Type: TC
Location: 76123 - 77013 (+)
Gene ID: HRGMv2_4525_2_66
Type: CAZyme
Location: 77021 - 79489 (+)
Gene ID: HRGMv2_4525_2_67
Type: pfam
Location: 79505 - 80572 (+)
Gene ID: HRGMv2_4525_2_68
Type: STP
Location: 80576 - 81763 (+)
Gene ID: HRGMv2_4525_2_69
Type: CAZyme
Location: 81800 - 82951 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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