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Cluster: HRGMv2_4525_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4525_53 HRGMv2_4525_53_2 1214 2047 + CE1
NULL(UNKNOWN) HRGMv2_4525_53 HRGMv2_4525_53_3 2161 2910 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4525_53 HRGMv2_4525_53_4 3122 4933 - GH2
TC HRGMv2_4525_53 HRGMv2_4525_53_5 5136 6251 + 3.A.1.1.38
TC HRGMv2_4525_53 HRGMv2_4525_53_6 6248 7162 + 3.A.1.1.23
TC HRGMv2_4525_53 HRGMv2_4525_53_7 7176 8039 + 3.A.1.1.20
STP HRGMv2_4525_53 HRGMv2_4525_53_8 8036 9643 + SBP_bac_1
NULL(UNKNOWN) HRGMv2_4525_53 HRGMv2_4525_53_9 9719 10531 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4525_53 HRGMv2_4525_53_10 11140 13206 - GH3
Gene ID: HRGMv2_4525_53_2
Type: CAZyme
Location: 1214 - 2047 (+)
Gene ID: HRGMv2_4525_53_3
Type:
Location: 2161 - 2910 (-)
Gene ID: HRGMv2_4525_53_4
Type: CAZyme
Location: 3122 - 4933 (-)
Gene ID: HRGMv2_4525_53_5
Type: TC
Location: 5136 - 6251 (+)
Gene ID: HRGMv2_4525_53_6
Type: TC
Location: 6248 - 7162 (+)
Gene ID: HRGMv2_4525_53_7
Type: TC
Location: 7176 - 8039 (+)
Gene ID: HRGMv2_4525_53_8
Type: STP
Location: 8036 - 9643 (+)
Gene ID: HRGMv2_4525_53_9
Type:
Location: 9719 - 10531 (+)
Gene ID: HRGMv2_4525_53_10
Type: CAZyme
Location: 11140 - 13206 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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