Cluster: HRGMv2_4525_CGC42
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4525_45 | HRGMv2_4525_45_16 | 16983 | 18167 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_4525_45 | HRGMv2_4525_45_17 | 18343 | 19299 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4525_45 | HRGMv2_4525_45_18 | 19325 | 20437 | - | Spore_permease |
| TC | HRGMv2_4525_45 | HRGMv2_4525_45_19 | 20427 | 21890 | - | 9.A.11.1.2 |
Gene ID: HRGMv2_4525_45_16
Type: CAZyme
Location: 16983 - 18167 (+)
Type: CAZyme
Location: 16983 - 18167 (+)
Gene ID: HRGMv2_4525_45_17
Type:
Location: 18343 - 19299 (-)
Type:
Location: 18343 - 19299 (-)
Gene ID: HRGMv2_4525_45_18
Type: pfam
Location: 19325 - 20437 (-)
Type: pfam
Location: 19325 - 20437 (-)
Gene ID: HRGMv2_4525_45_19
Type: TC
Location: 20427 - 21890 (-)
Type: TC
Location: 20427 - 21890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.