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Cluster: HRGMv2_4525_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4525_34 HRGMv2_4525_34_15 15713 17449 - GH43
CAZyme HRGMv2_4525_34 HRGMv2_4525_34_16 17442 19226 - GH2
NULL(UNKNOWN) HRGMv2_4525_34 HRGMv2_4525_34_17 20614 20760 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4525_34 HRGMv2_4525_34_18 20757 21803 - GH5_13
pfam HRGMv2_4525_34 HRGMv2_4525_34_19 21843 22694 - Glyco_hydro_4C
CAZyme HRGMv2_4525_34 HRGMv2_4525_34_20 22702 23715 - GH43
sulfatase HRGMv2_4525_34 HRGMv2_4525_34_21 23735 25018 - S1_104
TC HRGMv2_4525_34 HRGMv2_4525_34_22 25298 26167 - 3.A.1.1.10
TC HRGMv2_4525_34 HRGMv2_4525_34_23 26169 27131 - 3.A.1.1.10
TC HRGMv2_4525_34 HRGMv2_4525_34_24 27433 29055 - 3.A.1.1.10
Gene ID: HRGMv2_4525_34_15
Type: CAZyme
Location: 15713 - 17449 (-)
Gene ID: HRGMv2_4525_34_16
Type: CAZyme
Location: 17442 - 19226 (-)
Gene ID: HRGMv2_4525_34_17
Type:
Location: 20614 - 20760 (-)
Gene ID: HRGMv2_4525_34_18
Type: CAZyme
Location: 20757 - 21803 (-)
Gene ID: HRGMv2_4525_34_19
Type: pfam
Location: 21843 - 22694 (-)
Gene ID: HRGMv2_4525_34_20
Type: CAZyme
Location: 22702 - 23715 (-)
Gene ID: HRGMv2_4525_34_21
Type: sulfatase
Location: 23735 - 25018 (-)
Gene ID: HRGMv2_4525_34_22
Type: TC
Location: 25298 - 26167 (-)
Gene ID: HRGMv2_4525_34_23
Type: TC
Location: 26169 - 27131 (-)
Gene ID: HRGMv2_4525_34_24
Type: TC
Location: 27433 - 29055 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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