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Cluster: HRGMv2_4525_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4525_33 HRGMv2_4525_33_42 27628 28587 + 9.B.146.1.3
peptidase HRGMv2_4525_33 HRGMv2_4525_33_43 28663 30042 - M38.UNW
STP HRGMv2_4525_33 HRGMv2_4525_33_44 30035 30880 - CbiA
TC HRGMv2_4525_33 HRGMv2_4525_33_45 31005 32105 - 3.A.1.11.1
TC HRGMv2_4525_33 HRGMv2_4525_33_46 32232 33032 - 3.A.1.11.1
TC HRGMv2_4525_33 HRGMv2_4525_33_47 33029 33898 - 3.A.1.11.1
TC HRGMv2_4525_33 HRGMv2_4525_33_48 33895 34974 - 3.A.1.11.1
CAZyme HRGMv2_4525_33 HRGMv2_4525_33_49 35294 36148 + GT2
TC HRGMv2_4525_33 HRGMv2_4525_33_50 36607 37989 - 2.A.22.5.3
TC HRGMv2_4525_33 HRGMv2_4525_33_51 38118 38999 - 2.A.115.1.5
TC HRGMv2_4525_33 HRGMv2_4525_33_52 39278 40588 + 1.I.1.1.3
Gene ID: HRGMv2_4525_33_42
Type: TC
Location: 27628 - 28587 (+)
Gene ID: HRGMv2_4525_33_43
Type: peptidase
Location: 28663 - 30042 (-)
Gene ID: HRGMv2_4525_33_44
Type: STP
Location: 30035 - 30880 (-)
Gene ID: HRGMv2_4525_33_45
Type: TC
Location: 31005 - 32105 (-)
Gene ID: HRGMv2_4525_33_46
Type: TC
Location: 32232 - 33032 (-)
Gene ID: HRGMv2_4525_33_47
Type: TC
Location: 33029 - 33898 (-)
Gene ID: HRGMv2_4525_33_48
Type: TC
Location: 33895 - 34974 (-)
Gene ID: HRGMv2_4525_33_49
Type: CAZyme
Location: 35294 - 36148 (+)
Gene ID: HRGMv2_4525_33_50
Type: TC
Location: 36607 - 37989 (-)
Gene ID: HRGMv2_4525_33_51
Type: TC
Location: 38118 - 38999 (-)
Gene ID: HRGMv2_4525_33_52
Type: TC
Location: 39278 - 40588 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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