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Cluster: HRGMv2_4525_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4525_1 HRGMv2_4525_1_114 128154 129116 - 3.A.1.5.15
TC HRGMv2_4525_1 HRGMv2_4525_1_115 129103 130113 - 3.A.1.5.15
TC HRGMv2_4525_1 HRGMv2_4525_1_116 130127 131005 - 3.A.1.5.15
TC HRGMv2_4525_1 HRGMv2_4525_1_117 131011 131973 - 3.A.1.5.15
TC HRGMv2_4525_1 HRGMv2_4525_1_118 132160 133902 - 3.A.1.5.1
peptidase HRGMv2_4525_1 HRGMv2_4525_1_119 134208 135005 + M55.UPW
pfam HRGMv2_4525_1 HRGMv2_4525_1_120 135436 136719 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_4525_1 HRGMv2_4525_1_121 136808 138691 - GH20
Gene ID: HRGMv2_4525_1_114
Type: TC
Location: 128154 - 129116 (-)
Gene ID: HRGMv2_4525_1_115
Type: TC
Location: 129103 - 130113 (-)
Gene ID: HRGMv2_4525_1_116
Type: TC
Location: 130127 - 131005 (-)
Gene ID: HRGMv2_4525_1_117
Type: TC
Location: 131011 - 131973 (-)
Gene ID: HRGMv2_4525_1_118
Type: TC
Location: 132160 - 133902 (-)
Gene ID: HRGMv2_4525_1_119
Type: peptidase
Location: 134208 - 135005 (+)
Gene ID: HRGMv2_4525_1_120
Type: pfam
Location: 135436 - 136719 (-)
Gene ID: HRGMv2_4525_1_121
Type: CAZyme
Location: 136808 - 138691 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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