Cluster: HRGMv2_4525_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4525_11 | HRGMv2_4525_11_37 | 38145 | 40478 | + | GH36 |
| pfam | HRGMv2_4525_11 | HRGMv2_4525_11_38 | 40483 | 41640 | + | PCMT | Methyltransf_32 | Methyltransf_31 |
| TC | HRGMv2_4525_11 | HRGMv2_4525_11_39 | 41844 | 42962 | + | 9.B.10.1.1 |
| pfam | HRGMv2_4525_11 | HRGMv2_4525_11_40 | 42982 | 43923 | + | cobW | DUF1980_C |
| peptidase | HRGMv2_4525_11 | HRGMv2_4525_11_41 | 43958 | 44470 | + | S26.UPA |
| TC | HRGMv2_4525_11 | HRGMv2_4525_11_42 | 44509 | 45888 | + | 2.A.66.1.33 |
Gene ID: HRGMv2_4525_11_37
Type: CAZyme
Location: 38145 - 40478 (+)
Type: CAZyme
Location: 38145 - 40478 (+)
Gene ID: HRGMv2_4525_11_38
Type: pfam
Location: 40483 - 41640 (+)
Type: pfam
Location: 40483 - 41640 (+)
Gene ID: HRGMv2_4525_11_39
Type: TC
Location: 41844 - 42962 (+)
Type: TC
Location: 41844 - 42962 (+)
Gene ID: HRGMv2_4525_11_40
Type: pfam
Location: 42982 - 43923 (+)
Type: pfam
Location: 42982 - 43923 (+)
Gene ID: HRGMv2_4525_11_41
Type: peptidase
Location: 43958 - 44470 (+)
Type: peptidase
Location: 43958 - 44470 (+)
Gene ID: HRGMv2_4525_11_42
Type: TC
Location: 44509 - 45888 (+)
Type: TC
Location: 44509 - 45888 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.