Cluster: HRGMv2_4525_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4525_11 | HRGMv2_4525_11_7 | 6272 | 6841 | - | 3.A.1.26.10 |
| STP | HRGMv2_4525_11 | HRGMv2_4525_11_8 | 7197 | 7763 | + | HD |
| TF | HRGMv2_4525_11 | HRGMv2_4525_11_9 | 7985 | 8641 | - | HTH_AraC |
| CAZyme | HRGMv2_4525_11 | HRGMv2_4525_11_10 | 8793 | 10109 | + | GH29 |
Gene ID: HRGMv2_4525_11_7
Type: TC
Location: 6272 - 6841 (-)
Type: TC
Location: 6272 - 6841 (-)
Gene ID: HRGMv2_4525_11_8
Type: STP
Location: 7197 - 7763 (+)
Type: STP
Location: 7197 - 7763 (+)
Gene ID: HRGMv2_4525_11_9
Type: TF
Location: 7985 - 8641 (-)
Type: TF
Location: 7985 - 8641 (-)
Gene ID: HRGMv2_4525_11_10
Type: CAZyme
Location: 8793 - 10109 (+)
Type: CAZyme
Location: 8793 - 10109 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.