Cluster: HRGMv2_4525_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4525_9 | HRGMv2_4525_9_21 | 20452 | 21303 | - | GT8 |
| pfam | HRGMv2_4525_9 | HRGMv2_4525_9_22 | 21325 | 22173 | - | Patatin | DUF6363 |
| TF | HRGMv2_4525_9 | HRGMv2_4525_9_23 | 22538 | 22969 | + | MarR |
| TC | HRGMv2_4525_9 | HRGMv2_4525_9_24 | 23116 | 23694 | + | 2.A.115.2.14 |
| TC | HRGMv2_4525_9 | HRGMv2_4525_9_25 | 23889 | 24692 | + | 2.A.5.5.5 |
Gene ID: HRGMv2_4525_9_21
Type: CAZyme
Location: 20452 - 21303 (-)
Type: CAZyme
Location: 20452 - 21303 (-)
Gene ID: HRGMv2_4525_9_22
Type: pfam
Location: 21325 - 22173 (-)
Type: pfam
Location: 21325 - 22173 (-)
Gene ID: HRGMv2_4525_9_23
Type: TF
Location: 22538 - 22969 (+)
Type: TF
Location: 22538 - 22969 (+)
Gene ID: HRGMv2_4525_9_24
Type: TC
Location: 23116 - 23694 (+)
Type: TC
Location: 23116 - 23694 (+)
Gene ID: HRGMv2_4525_9_25
Type: TC
Location: 23889 - 24692 (+)
Type: TC
Location: 23889 - 24692 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.