Cluster: HRGMv2_4525_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4525_8 | HRGMv2_4525_8_68 | 72952 | 73524 | + | GH23 |
| peptidase | HRGMv2_4525_8 | HRGMv2_4525_8_69 | 73598 | 74992 | + | M18.UPW |
| TC | HRGMv2_4525_8 | HRGMv2_4525_8_70 | 75549 | 76271 | + | 3.A.1.125.3 |
| NULL(UNKNOWN) | HRGMv2_4525_8 | HRGMv2_4525_8_71 | 76268 | 78019 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4525_8 | HRGMv2_4525_8_72 | 78016 | 79362 | + | 3.A.1.122.12 |
Gene ID: HRGMv2_4525_8_68
Type: CAZyme
Location: 72952 - 73524 (+)
Type: CAZyme
Location: 72952 - 73524 (+)
Gene ID: HRGMv2_4525_8_69
Type: peptidase
Location: 73598 - 74992 (+)
Type: peptidase
Location: 73598 - 74992 (+)
Gene ID: HRGMv2_4525_8_70
Type: TC
Location: 75549 - 76271 (+)
Type: TC
Location: 75549 - 76271 (+)
Gene ID: HRGMv2_4525_8_71
Type:
Location: 76268 - 78019 (+)
Type:
Location: 76268 - 78019 (+)
Gene ID: HRGMv2_4525_8_72
Type: TC
Location: 78016 - 79362 (+)
Type: TC
Location: 78016 - 79362 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4525_8_70 | vegetarian > vegan | 1.49767 | 0.00455 |