Cluster: HRGMv2_4525_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4525_7 | HRGMv2_4525_7_53 | 55435 | 56298 | + | 2.A.119.2.2 |
| NULL(UNKNOWN) | HRGMv2_4525_7 | HRGMv2_4525_7_54 | 56370 | 56633 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4525_7 | HRGMv2_4525_7_55 | 56734 | 57369 | - | 2.A.115.2.14 |
| TC | HRGMv2_4525_7 | HRGMv2_4525_7_56 | 57558 | 58139 | - | 2.A.88.3.1 |
| STP | HRGMv2_4525_7 | HRGMv2_4525_7_57 | 58393 | 59022 | - | HhH-GPD |
| STP | HRGMv2_4525_7 | HRGMv2_4525_7_58 | 59274 | 60527 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_4525_7 | HRGMv2_4525_7_59 | 60569 | 61387 | + | CE1 |
Gene ID: HRGMv2_4525_7_53
Type: TC
Location: 55435 - 56298 (+)
Type: TC
Location: 55435 - 56298 (+)
Gene ID: HRGMv2_4525_7_54
Type:
Location: 56370 - 56633 (-)
Type:
Location: 56370 - 56633 (-)
Gene ID: HRGMv2_4525_7_55
Type: TC
Location: 56734 - 57369 (-)
Type: TC
Location: 56734 - 57369 (-)
Gene ID: HRGMv2_4525_7_56
Type: TC
Location: 57558 - 58139 (-)
Type: TC
Location: 57558 - 58139 (-)
Gene ID: HRGMv2_4525_7_57
Type: STP
Location: 58393 - 59022 (-)
Type: STP
Location: 58393 - 59022 (-)
Gene ID: HRGMv2_4525_7_58
Type: STP
Location: 59274 - 60527 (+)
Type: STP
Location: 59274 - 60527 (+)
Gene ID: HRGMv2_4525_7_59
Type: CAZyme
Location: 60569 - 61387 (+)
Type: CAZyme
Location: 60569 - 61387 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.