Cluster: HRGMv2_4525_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4525_6 | HRGMv2_4525_6_19 | 20010 | 20900 | + | 3.A.1.1.20 |
| TC | HRGMv2_4525_6 | HRGMv2_4525_6_20 | 20920 | 21816 | + | 3.A.1.1.18 |
| pfam | HRGMv2_4525_6 | HRGMv2_4525_6_21 | 21831 | 22034 | + | DUF6903 |
| CAZyme | HRGMv2_4525_6 | HRGMv2_4525_6_22 | 22093 | 24252 | + | GH112 |
Gene ID: HRGMv2_4525_6_19
Type: TC
Location: 20010 - 20900 (+)
Type: TC
Location: 20010 - 20900 (+)
Gene ID: HRGMv2_4525_6_20
Type: TC
Location: 20920 - 21816 (+)
Type: TC
Location: 20920 - 21816 (+)
Gene ID: HRGMv2_4525_6_21
Type: pfam
Location: 21831 - 22034 (+)
Type: pfam
Location: 21831 - 22034 (+)
Gene ID: HRGMv2_4525_6_22
Type: CAZyme
Location: 22093 - 24252 (+)
Type: CAZyme
Location: 22093 - 24252 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.