Cluster: HRGMv2_4525_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4525
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4525_5 | HRGMv2_4525_5_7 | 4891 | 7128 | - | GH3 |
| TC | HRGMv2_4525_5 | HRGMv2_4525_5_8 | 7174 | 8523 | - | 2.A.66.1.7 |
| pfam | HRGMv2_4525_5 | HRGMv2_4525_5_9 | 8563 | 9402 | - | NAT_N | GNAT_C |
| CAZyme | HRGMv2_4525_5 | HRGMv2_4525_5_10 | 9433 | 10743 | - | GH13_20 |
Gene ID: HRGMv2_4525_5_7
Type: CAZyme
Location: 4891 - 7128 (-)
Type: CAZyme
Location: 4891 - 7128 (-)
Gene ID: HRGMv2_4525_5_8
Type: TC
Location: 7174 - 8523 (-)
Type: TC
Location: 7174 - 8523 (-)
Gene ID: HRGMv2_4525_5_9
Type: pfam
Location: 8563 - 9402 (-)
Type: pfam
Location: 8563 - 9402 (-)
Gene ID: HRGMv2_4525_5_10
Type: CAZyme
Location: 9433 - 10743 (-)
Type: CAZyme
Location: 9433 - 10743 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.