Cluster: HRGMv2_4519_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4519
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4519_64 | HRGMv2_4519_64_3 | 4258 | 5691 | + | GH1 |
| TC | HRGMv2_4519_64 | HRGMv2_4519_64_4 | 5724 | 7124 | + | 4.A.1.2.11 |
| NULL(UNKNOWN) | HRGMv2_4519_64 | HRGMv2_4519_64_5 | 7225 | 8040 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4519_64 | HRGMv2_4519_64_6 | 8110 | 10251 | - | Hydantoinase_A | Hydant_A_N |
| TC | HRGMv2_4519_64 | HRGMv2_4519_64_7 | 10443 | 10934 | - | 2.A.11.2.1 |
Gene ID: HRGMv2_4519_64_3
Type: CAZyme
Location: 4258 - 5691 (+)
Type: CAZyme
Location: 4258 - 5691 (+)
Gene ID: HRGMv2_4519_64_4
Type: TC
Location: 5724 - 7124 (+)
Type: TC
Location: 5724 - 7124 (+)
Gene ID: HRGMv2_4519_64_5
Type:
Location: 7225 - 8040 (-)
Type:
Location: 7225 - 8040 (-)
Gene ID: HRGMv2_4519_64_6
Type: pfam
Location: 8110 - 10251 (-)
Type: pfam
Location: 8110 - 10251 (-)
Gene ID: HRGMv2_4519_64_7
Type: TC
Location: 10443 - 10934 (-)
Type: TC
Location: 10443 - 10934 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.