Cluster: HRGMv2_4519_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4519
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4519_53 | HRGMv2_4519_53_8 | 10606 | 11895 | - | 3.A.1.103.5 |
| TC | HRGMv2_4519_53 | HRGMv2_4519_53_9 | 11909 | 12769 | - | 3.A.1.103.5 |
| CAZyme | HRGMv2_4519_53 | HRGMv2_4519_53_10 | 12815 | 13789 | - | GT2 |
| CAZyme | HRGMv2_4519_53 | HRGMv2_4519_53_11 | 13815 | 14816 | - | GT2 |
Gene ID: HRGMv2_4519_53_8
Type: TC
Location: 10606 - 11895 (-)
Type: TC
Location: 10606 - 11895 (-)
Gene ID: HRGMv2_4519_53_9
Type: TC
Location: 11909 - 12769 (-)
Type: TC
Location: 11909 - 12769 (-)
Gene ID: HRGMv2_4519_53_10
Type: CAZyme
Location: 12815 - 13789 (-)
Type: CAZyme
Location: 12815 - 13789 (-)
Gene ID: HRGMv2_4519_53_11
Type: CAZyme
Location: 13815 - 14816 (-)
Type: CAZyme
Location: 13815 - 14816 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.