Cluster: HRGMv2_4519_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4519
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4519_20 | HRGMv2_4519_20_27 | 30063 | 30956 | - | 8.A.21.2.2 |
| pfam | HRGMv2_4519_20 | HRGMv2_4519_20_28 | 30987 | 31436 | - | NfeD |
| CAZyme | HRGMv2_4519_20 | HRGMv2_4519_20_29 | 31664 | 33514 | - | GH13_39 |
| CAZyme | HRGMv2_4519_20 | HRGMv2_4519_20_30 | 33587 | 35989 | - | GT35 |
Gene ID: HRGMv2_4519_20_27
Type: TC
Location: 30063 - 30956 (-)
Type: TC
Location: 30063 - 30956 (-)
Gene ID: HRGMv2_4519_20_28
Type: pfam
Location: 30987 - 31436 (-)
Type: pfam
Location: 30987 - 31436 (-)
Gene ID: HRGMv2_4519_20_29
Type: CAZyme
Location: 31664 - 33514 (-)
Type: CAZyme
Location: 31664 - 33514 (-)
Gene ID: HRGMv2_4519_20_30
Type: CAZyme
Location: 33587 - 35989 (-)
Type: CAZyme
Location: 33587 - 35989 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.