Cluster: HRGMv2_4519_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4519
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4519_17 | HRGMv2_4519_17_25 | 34423 | 35820 | + | GH165 |
| TC | HRGMv2_4519_17 | HRGMv2_4519_17_26 | 35843 | 36778 | + | 3.A.1.1.10 |
| TC | HRGMv2_4519_17 | HRGMv2_4519_17_27 | 36797 | 37699 | + | 3.A.1.1.10 |
Gene ID: HRGMv2_4519_17_25
Type: CAZyme
Location: 34423 - 35820 (+)
Type: CAZyme
Location: 34423 - 35820 (+)
Gene ID: HRGMv2_4519_17_26
Type: TC
Location: 35843 - 36778 (+)
Type: TC
Location: 35843 - 36778 (+)
Gene ID: HRGMv2_4519_17_27
Type: TC
Location: 36797 - 37699 (+)
Type: TC
Location: 36797 - 37699 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.