Cluster: HRGMv2_4519_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4519
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4519_12 | HRGMv2_4519_12_41 | 48849 | 49793 | + | GT2 |
| pfam | HRGMv2_4519_12 | HRGMv2_4519_12_42 | 49790 | 50149 | + | EamA |
| TC | HRGMv2_4519_12 | HRGMv2_4519_12_43 | 50146 | 50493 | + | 2.A.7.33.5 |
Gene ID: HRGMv2_4519_12_41
Type: CAZyme
Location: 48849 - 49793 (+)
Type: CAZyme
Location: 48849 - 49793 (+)
Gene ID: HRGMv2_4519_12_42
Type: pfam
Location: 49790 - 50149 (+)
Type: pfam
Location: 49790 - 50149 (+)
Gene ID: HRGMv2_4519_12_43
Type: TC
Location: 50146 - 50493 (+)
Type: TC
Location: 50146 - 50493 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.