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Cluster: HRGMv2_4436_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4436_8 HRGMv2_4436_8_45 44856 46232 + 2.A.66.1.33
NULL(UNKNOWN) HRGMv2_4436_8 HRGMv2_4436_8_46 46286 46921 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4436_8 HRGMv2_4436_8_47 47204 47455 - Holin_SPP1
CAZyme HRGMv2_4436_8 HRGMv2_4436_8_48 47485 48114 - GH25
NULL(UNKNOWN) HRGMv2_4436_8 HRGMv2_4436_8_49 48114 48887 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4436_8 HRGMv2_4436_8_50 49238 50533 + DUF348 | 3D | G5
CAZyme HRGMv2_4436_8 HRGMv2_4436_8_51 50820 53117 + CBM48 | GH13_9
pfam HRGMv2_4436_8 HRGMv2_4436_8_52 53199 54392 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4436_8 HRGMv2_4436_8_53 54386 55513 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4436_8 HRGMv2_4436_8_54 55664 57082 + GT5
Gene ID: HRGMv2_4436_8_45
Type: TC
Location: 44856 - 46232 (+)
Gene ID: HRGMv2_4436_8_46
Type:
Location: 46286 - 46921 (-)
Gene ID: HRGMv2_4436_8_47
Type: pfam
Location: 47204 - 47455 (-)
Gene ID: HRGMv2_4436_8_48
Type: CAZyme
Location: 47485 - 48114 (-)
Gene ID: HRGMv2_4436_8_49
Type:
Location: 48114 - 48887 (-)
Gene ID: HRGMv2_4436_8_50
Type: pfam
Location: 49238 - 50533 (+)
Gene ID: HRGMv2_4436_8_51
Type: CAZyme
Location: 50820 - 53117 (+)
Gene ID: HRGMv2_4436_8_52
Type: pfam
Location: 53199 - 54392 (+)
Gene ID: HRGMv2_4436_8_53
Type: pfam
Location: 54386 - 55513 (+)
Gene ID: HRGMv2_4436_8_54
Type: CAZyme
Location: 55664 - 57082 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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