PROTEIN: HRGMv2_4436_8_46
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Protein File & Metadata
Source:
HRGMv2_4436_8_46.pdb
Genome ID:
Protein ID:
HRGMv2_4436_8_46
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Protein Sequence
MINMVKLPTN KSSLFLRVAK GHFATSHSHI NYYIDVTTQK SRLSEAKAVA KELVAAYQHS 60 TIVDTVLCLD GTQVIGTCLA NELTKDGFSN MNAHQTIYVI TPEYTTGSQI ILRDNLAPMV 120 KGKHVLILAA SITTGYTAQA AIEAVNYYGG TVAGLSAIFA TTSECLGIPV TSIFDPASLP 180 DYASYDSRSC PLCKAGQHID ALVNSFGYSA L 211
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9PIR1-F1-model_v4 | 9 | 209 | 1 | 202 | 0.7358 |
0.782 |
| AF-P56162-F1-model_v4 | 9 | 210 | 1 | 201 | 0.7104 |
0.7565 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4paw-assembly1.cif.gz_A | 9 | 203 | 2 | 197 | 0.7267 |
0.7852 |
| 1vch-assembly2.cif.gz_C | 2 | 183 | 1 | 169 | 0.6928 |
0.7924 |
| 1vch-assembly1.cif.gz_B | 2 | 183 | 1 | 170 | 0.6916 |
0.789 |
| 1vch-assembly2.cif.gz_D | 2 | 183 | 1 | 173 | 0.687 |
0.7778 |
| 7f06-assembly2.cif.gz_B | 1 | 192 | 2 | 174 | 0.6862 |
0.7803 |
| 7f06-assembly1.cif.gz_A | 1 | 192 | 3 | 181 | 0.6778 |
0.7629 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3AC07-F1-model_v4 | 9 | 206 | 4 | 190 | 0.7669 |
0.8461 |
| AF-Q9RX68-F1-model_v4 | 9 | 203 | 2 | 194 | 0.7625 |
0.825 |
| AF-B5EQ26-F1-model_v4 | 8 | 209 | 2 | 194 | 0.7556 |
0.8194 |
| AF-A1BJI2-F1-model_v4 | 8 | 210 | 3 | 192 | 0.7554 |
0.8287 |
| AF-B0KA31-F1-model_v4 | 8 | 206 | 3 | 188 | 0.7537 |
0.8352 |
| AF-A6LJP2-F1-model_v4 | 9 | 208 | 1 | 186 | 0.7463 |
0.8249 |
| AF-B9MS28-F1-model_v4 | 8 | 206 | 3 | 188 | 0.7452 |
0.8268 |
| AF-B0K2E4-F1-model_v4 | 8 | 209 | 3 | 189 | 0.7425 |
0.8208 |
| AF-P58858-F1-model_v4 | 8 | 207 | 3 | 188 | 0.742 |
0.8231 |
| AF-B1L9F7-F1-model_v4 | 10 | 208 | 1 | 186 | 0.742 |
0.8189 |