Cluster: HRGMv2_4432_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4432
- CGC Family ID: CGCFAM_05342
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4432_13 | HRGMv2_4432_13_3 | 2044 | 2925 | + | CE4 |
| TC | HRGMv2_4432_13 | HRGMv2_4432_13_4 | 2962 | 3588 | + | 9.B.28.1.3 |
| NULL(UNKNOWN) | HRGMv2_4432_13 | HRGMv2_4432_13_5 | 3609 | 4583 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4432_13 | HRGMv2_4432_13_6 | 4580 | 6271 | + | GH13_18 |
| CAZyme | HRGMv2_4432_13 | HRGMv2_4432_13_7 | 6284 | 7159 | + | CE1 |
Gene ID: HRGMv2_4432_13_3
Type: CAZyme
Location: 2044 - 2925 (+)
Type: CAZyme
Location: 2044 - 2925 (+)
Gene ID: HRGMv2_4432_13_4
Type: TC
Location: 2962 - 3588 (+)
Type: TC
Location: 2962 - 3588 (+)
Gene ID: HRGMv2_4432_13_5
Type:
Location: 3609 - 4583 (+)
Type:
Location: 3609 - 4583 (+)
Gene ID: HRGMv2_4432_13_6
Type: CAZyme
Location: 4580 - 6271 (+)
Type: CAZyme
Location: 4580 - 6271 (+)
Gene ID: HRGMv2_4432_13_7
Type: CAZyme
Location: 6284 - 7159 (+)
Type: CAZyme
Location: 6284 - 7159 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.