PROTEIN: HRGMv2_4432_13_5
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Protein File & Metadata
Source:
HRGMv2_4432_13_5.pdb
Genome ID:
Protein ID:
HRGMv2_4432_13_5
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Protein Sequence
MGDIKTILRE RKDWTAPEVG EDIPHGDMPG DKVQIGPDHI RKAEKIFRKL LELLPEAVER 60 NASGRVVLTV CGGSGVGKSE IASLLSYYFR RLGIGSYTLS GDNYPRRIPK YNDAERLRLF 120 RQAGIRGLVK ADLLTDDVFA ELKALQDQEV DADTAYEKKY PWFSTYLDSA LAGLRGYLGT 180 DQEIDFSEIS HIVSQFKAGE NHIWLKRMGR GESDLWYEKV DFTDIDVLVI EWTHGNSDNY 240 TGVDIPVLLN STPEETLAHR RSRNRDGKTD SPFTMRVLEI EQGMLEAQAH KARIILSKQG 300 EFLSFDQYEA LMAASSSGKE GKRK 324
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0FCD1-F1-model_v4 | 11 | 305 | 22 | 308 | 0.6198 |
0.6973 |
| AF-A0A0K0J2G2-F1-model_v4 | 61 | 302 | 13 | 210 | 0.5369 |
0.7642 |
| AF-B4FN69-F1-model_v4 | 12 | 301 | 45 | 323 | 0.5308 |
0.6269 |
| AF-G4VLZ9-F1-model_v4 | 17 | 302 | 45 | 262 | 0.3933 |
0.7235 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QTE27753.1 | GH13 | 28 | 324 | 1 | 789 | 0.6041 |
0.9541 |
| UEG54185.1 | GH0 | 18 | 306 | 334 | 617 | 0.457 |
0.6858 |
| AF-G4T4R7-F1-model_v4 | GH36 | 15 | 305 | 677 | 935 | 0.4535 |
0.8409 |
| AF-C4ZBZ0-F1-model_v4 | GH36 | 15 | 305 | 683 | 952 | 0.4532 |
0.8102 |
| AF-A0A2Z4UA59-F1-model_v4 | GH36 | 15 | 305 | 677 | 935 | 0.4527 |
0.8392 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1sq5-assembly3.cif.gz_C-3 | 13 | 306 | 15 | 297 | 0.6112 |
0.6855 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q03PP4-F1-model_v4 | 11 | 306 | 19 | 306 | 0.6228 |
0.6957 |
| AF-B1MKN0-F1-model_v4 | 11 | 305 | 22 | 308 | 0.6201 |
0.6974 |
| AF-C1AYH1-F1-model_v4 | 11 | 305 | 22 | 308 | 0.6199 |
0.6979 |
| AF-Q1CN90-F1-model_v4 | 12 | 305 | 25 | 315 | 0.6084 |
0.682 |
| AF-A7MQP3-F1-model_v4 | 12 | 305 | 25 | 315 | 0.6082 |
0.6818 |
| AF-G4T4R7-F1-model_v4 | 15 | 305 | 677 | 935 | 0.4535 |
0.8409 |