Cluster: HRGMv2_4423_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4423
- CGC Family ID: CGCFAM_00271
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4423_38 | HRGMv2_4423_38_2 | 303 | 2705 | + | GT35 |
| CAZyme | HRGMv2_4423_38 | HRGMv2_4423_38_3 | 2724 | 4574 | + | GH13_39 |
| NULL(UNKNOWN) | HRGMv2_4423_38 | HRGMv2_4423_38_4 | 4579 | 5250 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4423_38 | HRGMv2_4423_38_5 | 5290 | 6786 | - | 2.A.25.1.5 |
Gene ID: HRGMv2_4423_38_2
Type: CAZyme
Location: 303 - 2705 (+)
Type: CAZyme
Location: 303 - 2705 (+)
Gene ID: HRGMv2_4423_38_3
Type: CAZyme
Location: 2724 - 4574 (+)
Type: CAZyme
Location: 2724 - 4574 (+)
Gene ID: HRGMv2_4423_38_4
Type:
Location: 4579 - 5250 (+)
Type:
Location: 4579 - 5250 (+)
Gene ID: HRGMv2_4423_38_5
Type: TC
Location: 5290 - 6786 (-)
Type: TC
Location: 5290 - 6786 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
SFWF01
Species
SFWF01 sp949293385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.