PROTEIN: HRGMv2_4423_38_4
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Protein File & Metadata
Source:
HRGMv2_4423_38_4.pdb
Genome ID:
Protein ID:
HRGMv2_4423_38_4
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Protein Sequence
MFRYETHLHT YPVSRCAQVG VRETLDFYKN IGYQGVFITN HFLDGNINID SEASFEEKIE 60 FYFSDFEEGK KHGKDIELDV FCGIEMSYKG TDFLIYGLDK KWWLEHPEIM LMKKSDQLPV 120 LAANGALVIQ AHPFRNASYL DHIRLFPDQV HGTEVVNSCN DELANKMAKI YAENYGLLPF 180 AGSDNHIGSR KTNLSGVETF RPVKDEKDFV DIILSKEYKI FSE 223
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44176-F1-model_v4 | 1 | 215 | 2 | 274 | 0.6015 |
0.705 |
| AF-K0F5S1-F1-model_v4 | 1 | 214 | 23 | 302 | 0.5965 |
0.7357 |
| AF-Q9HZ40-F1-model_v4 | 2 | 212 | 1 | 286 | 0.5941 |
0.7278 |
| AF-Q5FAE5-F1-model_v4 | 3 | 215 | 1 | 276 | 0.5907 |
0.7024 |
| AF-A0A0D2GG65-F1-model_v4 | 1 | 223 | 178 | 388 | 0.5653 |
0.8244 |
| AF-Q9ZQI9-F1-model_v4 | 1 | 214 | 30 | 348 | 0.5131 |
0.7137 |
| AF-Q9I5Q2-F1-model_v4 | 1 | 208 | 9 | 253 | 0.4119 |
0.7305 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WCB91666.1 | GT4 | 1 | 223 | 426 | 623 | 0.5051 |
0.8532 |
| AF-D3FAF3-F1-model_v4 | GT4 | 1 | 223 | 407 | 602 | 0.5033 |
0.8503 |
| AF-B4U8C3-F1-model_v4 | GT4 | 1 | 223 | 1 | 236 | 0.503 |
0.7894 |
| AF-C1DVV9-F1-model_v4 | GT4 | 1 | 223 | 1 | 236 | 0.5026 |
0.788 |
| AF-A0A0U4N2S2-F1-model_v4 | GT4 | 1 | 223 | 5 | 244 | 0.4993 |
0.7818 |
| AF-A0A5B8U4C2-F1-model_v4 | GT4 | 1 | 223 | 6 | 222 | 0.4989 |
0.8008 |
| AF-A0A6P1MAB4-F1-model_v4 | GT4 | 1 | 223 | 3 | 241 | 0.4975 |
0.7869 |
| AF-F8AAV1-F1-model_v4 | GT4 | 1 | 223 | 5 | 243 | 0.4969 |
0.779 |
| AF-A0A4P6PD36-F1-model_v4 | GT4 | 1 | 223 | 7 | 245 | 0.4969 |
0.7867 |
| AF-A0A2Z6B219-F1-model_v4 | GT4 | 1 | 223 | 5 | 242 | 0.4933 |
0.7847 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WCB91666.1 | GT4 | 1 | 223 | 426 | 623 | 0.5051 |
0.8532 |
| D0LZR8 | GT4 | 1 | 223 | 7 | 246 | 0.5037 |
0.7991 |
| B4U8C3 | GT4 | 1 | 223 | 1 | 236 | 0.503 |
0.7894 |
| A0A510HLQ9 | GT4 | 1 | 223 | 5 | 246 | 0.4996 |
0.78 |
| A0A0U4N2S2 | GT4 | 1 | 223 | 5 | 244 | 0.4993 |
0.7818 |
| B3DYJ0 | GT4 | 1 | 223 | 21 | 259 | 0.4989 |
0.7941 |
| F8AAV1 | GT4 | 1 | 223 | 5 | 243 | 0.4969 |
0.779 |
| A0A9E9HFY6 | GT4 | 1 | 223 | 6 | 264 | 0.4936 |
0.7958 |
| A0A7G9NYI3 | GT4 | 1 | 223 | 9 | 247 | 0.493 |
0.7859 |
| A0A0G3EMM6 | GT4 | 1 | 223 | 7 | 245 | 0.4928 |
0.7854 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2anu-assembly1.cif.gz_A | 1 | 223 | 3 | 222 | 0.7466 |
0.7856 |
| 2anu-assembly2.cif.gz_F | 1 | 223 | 3 | 222 | 0.7457 |
0.7849 |
| 2anu-assembly1.cif.gz_C | 1 | 223 | 3 | 221 | 0.7451 |
0.7842 |
| 2anu-assembly1.cif.gz_B | 1 | 223 | 3 | 218 | 0.7383 |
0.7869 |
| 7rty-assembly2.cif.gz_B | 1 | 223 | 3 | 226 | 0.7115 |
0.7675 |
| 7ug9-assembly1.cif.gz_A | 3 | 217 | 1 | 206 | 0.6732 |
0.7273 |
| 3e38-assembly1.cif.gz_B | 1 | 223 | 18 | 240 | 0.645 |
0.7956 |
| 3e0f-assembly1.cif.gz_A | 1 | 211 | 4 | 281 | 0.6169 |
0.7468 |
| 2yb4-assembly1.cif.gz_A | 2 | 208 | 1 | 278 | 0.5844 |
0.7195 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44176-F1-model_v4 | 1 | 215 | 2 | 274 | 0.6015 |
0.705 |
| AF-O54453-F1-model_v4 | 1 | 217 | 11 | 288 | 0.5906 |
0.7045 |
| AF-Q21LY9-F1-model_v4 | 1 | 207 | 1 | 248 | 0.4231 |
0.7546 |
| AF-Q5QUT9-F1-model_v4 | 1 | 207 | 14 | 261 | 0.4215 |
0.753 |
| AF-Q4ZTG0-F1-model_v4 | 1 | 207 | 2 | 252 | 0.4191 |
0.7479 |
| AF-Q7UXK9-F1-model_v4 | 1 | 208 | 103 | 363 | 0.4178 |
0.7557 |
| AF-Q92ZJ6-F1-model_v4 | 1 | 208 | 1 | 250 | 0.4175 |
0.7489 |
| AF-Q48IB1-F1-model_v4 | 1 | 207 | 3 | 252 | 0.4173 |
0.7443 |
| AF-A6VAU7-F1-model_v4 | 1 | 208 | 2 | 246 | 0.4164 |
0.7387 |
| AF-Q8U642-F1-model_v4 | 1 | 208 | 1 | 250 | 0.4163 |
0.7468 |