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Cluster: HRGMv2_4421_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4421_16 HRGMv2_4421_16_3 2602 3078 + 9.B.18.1.2
NULL(UNKNOWN) HRGMv2_4421_16 HRGMv2_4421_16_4 3279 3536 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4421_16 HRGMv2_4421_16_5 3579 4796 + Aminotran_1_2
TC HRGMv2_4421_16 HRGMv2_4421_16_6 4799 5557 + 9.B.18.1.3
pfam HRGMv2_4421_16 HRGMv2_4421_16_7 5550 6218 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme HRGMv2_4421_16 HRGMv2_4421_16_8 6169 7926 + GT4 | GT4
CAZyme HRGMv2_4421_16 HRGMv2_4421_16_9 7938 8993 + GT4
NULL(UNKNOWN) HRGMv2_4421_16 HRGMv2_4421_16_10 8990 10135 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4421_16 HRGMv2_4421_16_11 10150 11235 + GT4
Gene ID: HRGMv2_4421_16_3
Type: TC
Location: 2602 - 3078 (+)
Gene ID: HRGMv2_4421_16_4
Type:
Location: 3279 - 3536 (+)
Gene ID: HRGMv2_4421_16_5
Type: STP
Location: 3579 - 4796 (+)
Gene ID: HRGMv2_4421_16_6
Type: TC
Location: 4799 - 5557 (+)
Gene ID: HRGMv2_4421_16_7
Type: pfam
Location: 5550 - 6218 (+)
Gene ID: HRGMv2_4421_16_8
Type: CAZyme
Location: 6169 - 7926 (+)
Gene ID: HRGMv2_4421_16_9
Type: CAZyme
Location: 7938 - 8993 (+)
Gene ID: HRGMv2_4421_16_10
Type:
Location: 8990 - 10135 (+)
Gene ID: HRGMv2_4421_16_11
Type: CAZyme
Location: 10150 - 11235 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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