PROTEIN: HRGMv2_4421_16_10
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Protein File & Metadata
Source:
HRGMv2_4421_16_10.pdb
Genome ID:
Protein ID:
HRGMv2_4421_16_10
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Protein Sequence
MKTAFLITNG NIGGSAGDST LILRRAKSMY EEKGIYTKIL LLDPVEQGTV NKGDCFYSIE 60 KCDSKKALME EILKIKPELI ILYGDKIQMM TAAIHKFVKK NRISAKVVVD IQGAVEEKKE 120 YSSSFIRKFV VYPVSRYFFA KAVKNADAAF VVSDEIRDKC EKARGSKPKQ IEYYKVRCGF 180 EELATIEQIK KYRDEFRKSK GITKSTKVFC YSGYRAGWQK VEDIINHFRR FDKFDPNCYF 240 AFFCNTDEHF EALLKQTFPR GNYCVELLKP QDYFKSLCGC DVGYILRDYN ETNRVAFPNK 300 FSDYLGSGLI VALNNALPEP MRLIKQMPAH YADTDTILHD IEALFQKLSD REANYDNFVK 360 ESLEFGKEEL LYSTQIRKLN I 381
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EXF1-F1-model_v4 | 1 | 381 | 1 | 373 | 0.8055 |
0.8369 |
| AF-X8F781-F1-model_v4 | 1 | 381 | 1 | 377 | 0.8018 |
0.8348 |
| AF-P9WMZ3-F1-model_v4 | 1 | 381 | 1 | 377 | 0.7962 |
0.8301 |
| AF-Q7AQE2-F1-model_v4 | 1 | 381 | 1 | 377 | 0.7958 |
0.828 |
| AF-Q58469-F1-model_v4 | 1 | 381 | 3 | 386 | 0.7919 |
0.8245 |
| AF-Q5F734-F1-model_v4 | 1 | 381 | 4 | 354 | 0.7869 |
0.8413 |
| AF-Q2G1J7-F1-model_v4 | 1 | 381 | 3 | 399 | 0.7866 |
0.8259 |
| AF-A0A133CHU6-F1-model_v4 | 2 | 381 | 1 | 375 | 0.7793 |
0.8344 |
| AF-A0A0H3GSJ8-F1-model_v4 | 1 | 381 | 3 | 346 | 0.7791 |
0.8501 |
| AF-Q9HZ80-F1-model_v4 | 2 | 381 | 1 | 407 | 0.7758 |
0.8284 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A173S1M9 | GT0 | 1 | 381 | 2 | 390 | 0.8466 |
0.8779 |
| QVW33803.1 | GT4 | 3 | 381 | 1 | 386 | 0.8405 |
0.8713 |
| AF-Q39VJ5-F1-model_v4 | GT0 | 1 | 381 | 3 | 404 | 0.8357 |
0.8847 |
| AF-G0J2U0-F1-model_v4 | GT0 | 2 | 381 | 1 | 392 | 0.8318 |
0.8685 |
| AF-A0A127B301-F1-model_v4 | GT4 | 1 | 381 | 3 | 402 | 0.8264 |
0.8696 |
| A0A937JZA8 | GT4 | 2 | 381 | 1 | 391 | 0.8259 |
0.8615 |
| AF-M9YRR6-F1-model_v4 | GT0 | 2 | 381 | 1 | 394 | 0.825 |
0.8775 |
| A0A1T3IYS5 | GT4 | 2 | 381 | 1 | 378 | 0.8249 |
0.8502 |
| AF-C1DN00-F1-model_v4 | GT0 | 2 | 381 | 1 | 394 | 0.8239 |
0.8765 |
| WBO20817.1 | GT4 | 2 | 381 | 1 | 386 | 0.8235 |
0.8555 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| ALZ64270.1 | GT4 | 1 | 381 | 3 | 385 | 0.8571 |
0.88 |
| QVW33803.1 | GT4 | 3 | 381 | 1 | 386 | 0.8405 |
0.8713 |
| AXV66459.1 | GT4 | 2 | 381 | 1 | 388 | 0.8386 |
0.8699 |
| UOE80914.1 | GT4 | 2 | 381 | 1 | 392 | 0.8337 |
0.8671 |
| A0A160T2Q2 | GT4 | 2 | 381 | 1 | 392 | 0.8289 |
0.8645 |
| A0A937JZA8 | GT4 | 2 | 381 | 1 | 391 | 0.8259 |
0.8615 |
| UCS92001.1 | GT4 | 1 | 381 | 6 | 401 | 0.8258 |
0.8696 |
| A0A1T3IYS5 | GT4 | 2 | 381 | 1 | 378 | 0.8249 |
0.8502 |
| WBO20817.1 | GT4 | 2 | 381 | 1 | 386 | 0.8235 |
0.8555 |
| BDZ80931.1 | GT4 | 2 | 381 | 1 | 402 | 0.8234 |
0.871 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3oka-assembly1.cif.gz_A | 1 | 381 | 1 | 372 | 0.8016 |
0.839 |
| 2jjm-assembly1.cif.gz_B | 1 | 381 | 1 | 354 | 0.776 |
0.8304 |
| 3mbo-assembly1.cif.gz_B | 1 | 381 | 1 | 362 | 0.772 |
0.8196 |
| 5d00-assembly1.cif.gz_B | 1 | 381 | 2 | 356 | 0.7705 |
0.824 |
| 3mbo-assembly3.cif.gz_F | 1 | 381 | 1 | 361 | 0.7691 |
0.8191 |
| 3mbo-assembly4.cif.gz_G | 1 | 381 | 1 | 357 | 0.7688 |
0.8222 |
| 5d01-assembly1.cif.gz_B | 1 | 381 | 2 | 355 | 0.7655 |
0.8203 |
| 5d00-assembly1.cif.gz_A | 1 | 381 | 2 | 355 | 0.764 |
0.8201 |
| 3mbo-assembly4.cif.gz_H | 1 | 381 | 1 | 361 | 0.7635 |
0.8145 |
| 7mi0-assembly1.cif.gz_A | 1 | 381 | 3 | 371 | 0.763 |
0.8064 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8NNK8-F1-model_v4 | 1 | 381 | 4 | 375 | 0.7994 |
0.8392 |
| AF-P9WMZ2-F1-model_v4 | 1 | 381 | 1 | 377 | 0.7985 |
0.8316 |
| AF-Q93P60-F1-model_v4 | 2 | 381 | 1 | 384 | 0.7979 |
0.8368 |
| AF-P9WMZ3-F1-model_v4 | 1 | 381 | 1 | 377 | 0.7962 |
0.8301 |
| AF-Q58469-F1-model_v4 | 1 | 381 | 3 | 386 | 0.7919 |
0.8245 |
| AF-A0R043-F1-model_v4 | 4 | 381 | 1 | 372 | 0.7914 |
0.8324 |
| AF-P46915-F1-model_v4 | 1 | 381 | 1 | 373 | 0.7841 |
0.817 |
| AF-O32267-F1-model_v4 | 1 | 381 | 6 | 393 | 0.7751 |
0.8108 |
| AF-O05083-F1-model_v4 | 1 | 381 | 1 | 352 | 0.7743 |
0.8269 |
| AF-Q46634-F1-model_v4 | 1 | 381 | 1 | 350 | 0.7724 |
0.8271 |