Cluster: HRGMv2_4420_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4420
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4420_56 | HRGMv2_4420_56_1 | 36 | 806 | + | 3.A.1.4.10 |
| TC | HRGMv2_4420_56 | HRGMv2_4420_56_2 | 812 | 1522 | + | 3.A.1.4.10 |
| NULL(UNKNOWN) | HRGMv2_4420_56 | HRGMv2_4420_56_3 | 1676 | 2689 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4420_56 | HRGMv2_4420_56_4 | 2637 | 3533 | - | GH173 |
| CAZyme | HRGMv2_4420_56 | HRGMv2_4420_56_5 | 3629 | 5542 | - | GH173 |
| CAZyme | HRGMv2_4420_56 | HRGMv2_4420_56_6 | 5576 | 7468 | - | GH173 |
Gene ID: HRGMv2_4420_56_1
Type: TC
Location: 36 - 806 (+)
Type: TC
Location: 36 - 806 (+)
Gene ID: HRGMv2_4420_56_2
Type: TC
Location: 812 - 1522 (+)
Type: TC
Location: 812 - 1522 (+)
Gene ID: HRGMv2_4420_56_3
Type:
Location: 1676 - 2689 (-)
Type:
Location: 1676 - 2689 (-)
Gene ID: HRGMv2_4420_56_4
Type: CAZyme
Location: 2637 - 3533 (-)
Type: CAZyme
Location: 2637 - 3533 (-)
Gene ID: HRGMv2_4420_56_5
Type: CAZyme
Location: 3629 - 5542 (-)
Type: CAZyme
Location: 3629 - 5542 (-)
Gene ID: HRGMv2_4420_56_6
Type: CAZyme
Location: 5576 - 7468 (-)
Type: CAZyme
Location: 5576 - 7468 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.