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PROTEIN: HRGMv2_4420_56_3

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Protein File & Metadata
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Source:
HRGMv2_4420_56_3.pdb
Genome ID:
HRGMv2_4420
Protein ID:
HRGMv2_4420_56_3

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Detailed structural information will appear here after analysis...

Protein Sequence 
MTIGWKKNEG   NILFGVFKDI   DKNDIYDNGK   PLPGVTADSV   AAMDPDRLKA   DFQTVSLRFH 60
TDATTTSGKI   GCFYDVKTPG   SALIGSFSLT   ETESSENLVE   NGDFSSFFDG   WTMLYCGGTI 120
DAYADWYKWC   KTGLQYVPNG   KPFCYDEYNV   TFDRDNSRPS   HGAEICTSAL   AFMNAGVQSS 180
LLWTVFDQQW   PNNHTYNADS   FVDGDHRCGV   MPVLNRSLVP   HLSYYAFTLI   SKYVDGEGTK 240
VYEGFGTNRI   QTTMAVSKTG   EITVIVVNSK   EEADDFTISF   AKPIQANFNR   HVFDPATCVP 300
DERAEIIGTD   RVIENATDTL   SDHIAAYGVT   VYTTMKD 337
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0D2G6R2-F1-model_v4 111 335 252 470 0.4159 0.7238
AF-A0A175VUB6-F1-model_v4 111 336 258 480 0.4035 0.6972
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0K1JKV0-F1-model_v4 GH51 22 335 7 225 0.609 0.7649
AF-A0A7H8QG83-F1-model_v4 GH51 117 335 1 238 0.5757 0.7438
AF-G9IS18-F1-model_v4 GH30_4 85 336 31 295 0.5505 0.6932
AF-A0A7R7W8L7-F1-model_v4 GH51 103 335 59 286 0.5279 0.7182
A0A401USB0 GH173 102 337 208 489 0.5077 0.8761
AF-A0A0A7K5X4-F1-model_v4 GH173 100 337 236 514 0.4864 0.8151
AF-E6X3Y8-F1-model_v4 GH173 100 337 236 514 0.4855 0.8135
AF-F0RG87-F1-model_v4 GH173 100 337 236 514 0.4851 0.8127
A0A7X9TEK1 GH173 99 335 239 521 0.4827 0.8174
AF-A0A1D9EPK4-F1-model_v4 GH30_8 103 335 97 330 0.4819 0.687
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0K1JKV0 GH51 22 335 7 225 0.609 0.7649
A0A7H8QG83 GH51 117 335 1 238 0.5757 0.7438
A0A401USB0 GH173 102 337 208 489 0.5077 0.8761
A0A4Y1WIP7 GH173 102 337 149 456 0.4994 0.8099
A0A415FZM3 GH173 101 335 236 533 0.4889 0.848
UMW87594.1 GH173 103 336 214 502 0.4888 0.8322
A0A1L7I224 GH173 102 336 184 494 0.4883 0.8203
A0A402D4Z1 GH173 99 337 226 500 0.4844 0.8054
A0A7X9TEK1 GH173 99 335 239 521 0.4827 0.8174
W0IZ67 GH173 1 337 17 504 0.4808 0.5842
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5l9z-assembly1.cif.gz_A 101 336 78 378 0.482 0.7205
7rg8-assembly1.cif.gz_A 102 336 78 378 0.482 0.7266
7pr7-assembly1.cif.gz_A 102 336 78 378 0.4814 0.7252
6zdm-assembly1.cif.gz_AAA 102 336 78 376 0.4797 0.7219
3kl3-assembly4.cif.gz_D 103 334 135 368 0.457 0.6852
5a6m-assembly1.cif.gz_A 103 333 150 389 0.4527 0.6995
3kl3-assembly1.cif.gz_A 103 335 150 389 0.4519 0.6914
4uqc-assembly1.cif.gz_A 103 333 151 390 0.4518 0.6976
4uqa-assembly1.cif.gz_A 97 333 99 391 0.4516 0.6773
5cxp-assembly1.cif.gz_A-2 103 335 152 386 0.4514 0.6903
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q6YK37-F1-model_v4 101 336 130 423 0.4432 0.6942
AF-Q45070-F1-model_v4 103 336 182 422 0.4406 0.6963
AF-Q5BA89-F1-model_v4 103 336 313 564 0.4087 0.7151
AF-Q0CTV2-F1-model_v4 101 335 375 628 0.3851 0.6951
AF-A2Q7E0-F1-model_v4 102 335 375 628 0.3847 0.6952
AF-Q2U790-F1-model_v4 102 335 375 629 0.3839 0.6984
Download Full SwissProt Results