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Cluster: HRGMv2_4419_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4419_14 HRGMv2_4419_14_3 1564 2805 - GT4
pfam HRGMv2_4419_14 HRGMv2_4419_14_4 2820 3872 - Acyl_transf_3
NULL(UNKNOWN) HRGMv2_4419_14 HRGMv2_4419_14_5 3862 5163 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4419_14 HRGMv2_4419_14_6 5179 6153 - GT2
CAZyme HRGMv2_4419_14 HRGMv2_4419_14_7 6155 8248 - GT4
pfam HRGMv2_4419_14 HRGMv2_4419_14_8 8245 9096 - HpcH_HpaI
pfam HRGMv2_4419_14 HRGMv2_4419_14_9 9136 9750 - PglD_N
TC HRGMv2_4419_14 HRGMv2_4419_14_10 9750 10454 - 9.B.18.1.2
Gene ID: HRGMv2_4419_14_3
Type: CAZyme
Location: 1564 - 2805 (-)
Gene ID: HRGMv2_4419_14_4
Type: pfam
Location: 2820 - 3872 (-)
Gene ID: HRGMv2_4419_14_5
Type:
Location: 3862 - 5163 (-)
Gene ID: HRGMv2_4419_14_6
Type: CAZyme
Location: 5179 - 6153 (-)
Gene ID: HRGMv2_4419_14_7
Type: CAZyme
Location: 6155 - 8248 (-)
Gene ID: HRGMv2_4419_14_8
Type: pfam
Location: 8245 - 9096 (-)
Gene ID: HRGMv2_4419_14_9
Type: pfam
Location: 9136 - 9750 (-)
Gene ID: HRGMv2_4419_14_10
Type: TC
Location: 9750 - 10454 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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