PROTEIN: HRGMv2_4419_14_5
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4419_14_5.pdb
Genome ID:
Protein ID:
HRGMv2_4419_14_5
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MENKLPKVLV VSTNAWRDNT GINTLIEFFK CWDADKVAQI YTKSALPDTS VCNKFFQISE 60 NAVIKSVFKR NTATGKEVSN QSEKISSEAA LQEQKMYSSY KGRVRFFLSI LREFVWKFGK 120 WHTKALDEFI DGFDADVLFI PVYPTVYMGR IQKYIIKKTG KPVISYLADD NYTYKSAGKN 180 LLSLLHRMFL RKYVKFIVKS SAELMVIAPK QKEEYDRIFG TDSIVMTKGI DFEPFVPYDV 240 NKPIKAVYTG KLIIGRWKSL AAVAEAMGKI NKNETKIELD IYTTDTLTDE QSKALNKNGC 300 AVKGALTLQE VNAVQKNADI LVFVESLEKK YRHTARLSFS TKITDYLKSG KCIFAIGDSE 360 IAPIDYFNKY DSAITASSYA EISKKLEALV YNTALIKEYA KKGYDCGIEH HERSKMNALL 420 TETINNVVMK NAE 433
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1K0-F1-model_v4 | 6 | 427 | 1 | 369 | 0.7632 |
0.8407 |
| AF-Q8CWU0-F1-model_v4 | 4 | 430 | 1 | 385 | 0.7491 |
0.811 |
| AF-Q58469-F1-model_v4 | 2 | 429 | 1 | 392 | 0.7491 |
0.8031 |
| AF-Q9HZ80-F1-model_v4 | 6 | 433 | 1 | 413 | 0.7437 |
0.7802 |
| AF-A0A0H3GSH7-F1-model_v4 | 4 | 431 | 3 | 381 | 0.7409 |
0.8105 |
| AF-Q5FAE0-F1-model_v4 | 6 | 430 | 1 | 388 | 0.74 |
0.7998 |
| AF-P71243-F1-model_v4 | 6 | 427 | 1 | 406 | 0.7393 |
0.7812 |
| AF-P27127-F1-model_v4 | 6 | 432 | 1 | 359 | 0.7387 |
0.8233 |
| AF-O05083-F1-model_v4 | 5 | 424 | 1 | 353 | 0.7384 |
0.8303 |
| AF-Q0P9C7-F1-model_v4 | 5 | 427 | 1 | 365 | 0.7381 |
0.8176 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6N2SY12 | GT4 | 1 | 431 | 2 | 432 | 0.9768 |
0.9847 |
| UVP27353.1 | GT0 | 1 | 431 | 2 | 434 | 0.9571 |
0.9696 |
| A0A501QA90 | GT0 | 2 | 432 | 1 | 435 | 0.9292 |
0.946 |
| UVR00600.1 | GT0 | 1 | 429 | 5 | 433 | 0.9285 |
0.946 |
| UYV02954.1 | GT0 | 6 | 427 | 1 | 425 | 0.9046 |
0.9315 |
| A0A943HN43 | GT0 | 6 | 431 | 1 | 422 | 0.8921 |
0.9189 |
| UYB47964.1 | GT0 | 1 | 430 | 1 | 434 | 0.8869 |
0.9082 |
| AF-A0A7U2NG01-F1-model_v4 | GT0 | 1 | 431 | 1 | 426 | 0.8803 |
0.9003 |
| A0A3E5EHE5 | GT0 | 4 | 433 | 1 | 433 | 0.8786 |
0.9044 |
| A0A3E0H5N2 | GT0 | 5 | 426 | 1 | 417 | 0.8758 |
0.9059 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6N2SY12 | GT4 | 1 | 431 | 2 | 432 | 0.9768 |
0.9847 |
| B1C3W4 | GT4 | 1 | 433 | 2 | 441 | 0.961 |
0.9771 |
| UBD70250.1 | GT4 | 6 | 433 | 1 | 424 | 0.9069 |
0.9328 |
| A0A7G9FUE7 | GT4 | 2 | 431 | 1 | 423 | 0.9064 |
0.9289 |
| K0NJA9 | GT4 | 1 | 433 | 17 | 451 | 0.857 |
0.8911 |
| A0A0H4PBF5 | GT4 | 3 | 433 | 1 | 440 | 0.8563 |
0.8854 |
| F4KR25 | GT4 | 3 | 433 | 1 | 439 | 0.8499 |
0.877 |
| A0A1A8Z660 | GT4 | 1 | 431 | 8 | 441 | 0.8309 |
0.8558 |
| A0A075KJ58 | GT4 | 2 | 427 | 1 | 423 | 0.8281 |
0.8534 |
| WBB52087.1 | GT4 | 1 | 433 | 9 | 449 | 0.8232 |
0.8593 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3oka-assembly1.cif.gz_A | 5 | 431 | 1 | 378 | 0.7485 |
0.8162 |
| 5n7z-assembly1.cif.gz_A | 6 | 430 | 1 | 357 | 0.7285 |
0.8142 |
| 7qsg-assembly1.cif.gz_A | 3 | 431 | 1 | 379 | 0.7284 |
0.7961 |
| 8fbx-assembly1.cif.gz_A | 4 | 433 | 1 | 306 | 0.723 |
0.8607 |
| 4xsp-assembly1.cif.gz_A | 5 | 427 | 1 | 365 | 0.7152 |
0.793 |
| 6kih-assembly2.cif.gz_B | 4 | 432 | 1 | 399 | 0.7151 |
0.7636 |
| 3c4q-assembly2.cif.gz_B | 6 | 431 | 1 | 393 | 0.715 |
0.7703 |
| 3c4q-assembly1.cif.gz_A | 6 | 431 | 1 | 393 | 0.715 |
0.7703 |
| 5d00-assembly1.cif.gz_B | 4 | 428 | 1 | 361 | 0.7065 |
0.7881 |
| 3mbo-assembly1.cif.gz_B | 4 | 433 | 1 | 369 | 0.7039 |
0.7786 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58469-F1-model_v4 | 2 | 429 | 1 | 392 | 0.7491 |
0.8031 |
| AF-Q8NNK8-F1-model_v4 | 2 | 431 | 1 | 381 | 0.7486 |
0.8138 |
| AF-Q46638-F1-model_v4 | 6 | 428 | 1 | 407 | 0.747 |
0.7872 |
| AF-P71243-F1-model_v4 | 6 | 427 | 1 | 406 | 0.7393 |
0.7812 |
| AF-P27127-F1-model_v4 | 6 | 432 | 1 | 359 | 0.7387 |
0.8233 |
| AF-O05083-F1-model_v4 | 5 | 424 | 1 | 353 | 0.7384 |
0.8303 |
| AF-Q0P9C7-F1-model_v4 | 5 | 427 | 1 | 365 | 0.7381 |
0.8176 |
| AF-Q8KIU8-F1-model_v4 | 4 | 433 | 1 | 400 | 0.7378 |
0.7879 |
| AF-P26388-F1-model_v4 | 6 | 427 | 1 | 406 | 0.7373 |
0.7792 |
| AF-P9WMZ3-F1-model_v4 | 5 | 430 | 1 | 384 | 0.7352 |
0.7978 |