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Cluster: HRGMv2_4412_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4412_9 HRGMv2_4412_9_4 4082 5806 + 3.A.1.5.2
TC HRGMv2_4412_9 HRGMv2_4412_9_5 5897 6817 + 3.A.1.5.19
TC HRGMv2_4412_9 HRGMv2_4412_9_6 6828 7787 + 3.A.1.5.2
TC HRGMv2_4412_9 HRGMv2_4412_9_7 7817 8887 + 3.A.1.5.19
TC HRGMv2_4412_9 HRGMv2_4412_9_8 8889 9893 + 3.A.1.5.15
CAZyme HRGMv2_4412_9 HRGMv2_4412_9_9 10417 11838 - GH1
CAZyme HRGMv2_4412_9 HRGMv2_4412_9_10 12017 13951 - GH13_9
Gene ID: HRGMv2_4412_9_4
Type: TC
Location: 4082 - 5806 (+)
Gene ID: HRGMv2_4412_9_5
Type: TC
Location: 5897 - 6817 (+)
Gene ID: HRGMv2_4412_9_6
Type: TC
Location: 6828 - 7787 (+)
Gene ID: HRGMv2_4412_9_7
Type: TC
Location: 7817 - 8887 (+)
Gene ID: HRGMv2_4412_9_8
Type: TC
Location: 8889 - 9893 (+)
Gene ID: HRGMv2_4412_9_9
Type: CAZyme
Location: 10417 - 11838 (-)
Gene ID: HRGMv2_4412_9_10
Type: CAZyme
Location: 12017 - 13951 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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