dbCAN Logo

Cluster: HRGMv2_4412_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4412_6 HRGMv2_4412_6_5 5482 6993 + GH39
TC HRGMv2_4412_6 HRGMv2_4412_6_6 7430 8773 + 2.A.66.1.33
STP HRGMv2_4412_6 HRGMv2_4412_6_7 8890 9375 + Sigma70_r2 | Sigma70_r4_2
pfam HRGMv2_4412_6 HRGMv2_4412_6_8 9372 10262 + DUF3298
TC HRGMv2_4412_6 HRGMv2_4412_6_9 10518 11573 + 2.A.36.2.1
TC HRGMv2_4412_6 HRGMv2_4412_6_10 11516 11728 + 2.A.36.2.1
CAZyme HRGMv2_4412_6 HRGMv2_4412_6_11 11832 14225 + GH39
CAZyme HRGMv2_4412_6 HRGMv2_4412_6_12 14472 15587 + GH179
Gene ID: HRGMv2_4412_6_5
Type: CAZyme
Location: 5482 - 6993 (+)
Gene ID: HRGMv2_4412_6_6
Type: TC
Location: 7430 - 8773 (+)
Gene ID: HRGMv2_4412_6_7
Type: STP
Location: 8890 - 9375 (+)
Gene ID: HRGMv2_4412_6_8
Type: pfam
Location: 9372 - 10262 (+)
Gene ID: HRGMv2_4412_6_9
Type: TC
Location: 10518 - 11573 (+)
Gene ID: HRGMv2_4412_6_10
Type: TC
Location: 11516 - 11728 (+)
Gene ID: HRGMv2_4412_6_11
Type: CAZyme
Location: 11832 - 14225 (+)
Gene ID: HRGMv2_4412_6_12
Type: CAZyme
Location: 14472 - 15587 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List