Cluster: HRGMv2_4412_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4412
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4412_90 | HRGMv2_4412_90_2 | 808 | 1827 | + | GT2 |
| pfam | HRGMv2_4412_90 | HRGMv2_4412_90_3 | 1892 | 2551 | + | PAP2 |
| pfam | HRGMv2_4412_90 | HRGMv2_4412_90_4 | 2836 | 4425 | + | FAD-depend_C |
| TC | HRGMv2_4412_90 | HRGMv2_4412_90_5 | 4415 | 5776 | + | 3.A.1.5.2 |
Gene ID: HRGMv2_4412_90_2
Type: CAZyme
Location: 808 - 1827 (+)
Type: CAZyme
Location: 808 - 1827 (+)
Gene ID: HRGMv2_4412_90_3
Type: pfam
Location: 1892 - 2551 (+)
Type: pfam
Location: 1892 - 2551 (+)
Gene ID: HRGMv2_4412_90_4
Type: pfam
Location: 2836 - 4425 (+)
Type: pfam
Location: 2836 - 4425 (+)
Gene ID: HRGMv2_4412_90_5
Type: TC
Location: 4415 - 5776 (+)
Type: TC
Location: 4415 - 5776 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecivivens
Species
Faecivivens sp944387995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.