Cluster: HRGMv2_4412_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4412
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4412_57 | HRGMv2_4412_57_1 | 3 | 1112 | - | 9.A.23.1.1 |
| pfam | HRGMv2_4412_57 | HRGMv2_4412_57_2 | 1265 | 1456 | - | DUF6472 |
| pfam | HRGMv2_4412_57 | HRGMv2_4412_57_3 | 1468 | 3009 | - | PLDc | PLDc | PLDc_2 | PLDc_2 | PLDc_N |
| TC | HRGMv2_4412_57 | HRGMv2_4412_57_4 | 3006 | 4304 | - | 2.A.86.1.8 |
| STP | HRGMv2_4412_57 | HRGMv2_4412_57_5 | 4481 | 5833 | - | Citrate_synt |
| pfam | HRGMv2_4412_57 | HRGMv2_4412_57_6 | 6015 | 7430 | - | PK | PK_C |
| CAZyme | HRGMv2_4412_57 | HRGMv2_4412_57_7 | 7756 | 8598 | + | CE1 |
Gene ID: HRGMv2_4412_57_1
Type: TC
Location: 3 - 1112 (-)
Type: TC
Location: 3 - 1112 (-)
Gene ID: HRGMv2_4412_57_2
Type: pfam
Location: 1265 - 1456 (-)
Type: pfam
Location: 1265 - 1456 (-)
Gene ID: HRGMv2_4412_57_3
Type: pfam
Location: 1468 - 3009 (-)
Type: pfam
Location: 1468 - 3009 (-)
Gene ID: HRGMv2_4412_57_4
Type: TC
Location: 3006 - 4304 (-)
Type: TC
Location: 3006 - 4304 (-)
Gene ID: HRGMv2_4412_57_5
Type: STP
Location: 4481 - 5833 (-)
Type: STP
Location: 4481 - 5833 (-)
Gene ID: HRGMv2_4412_57_6
Type: pfam
Location: 6015 - 7430 (-)
Type: pfam
Location: 6015 - 7430 (-)
Gene ID: HRGMv2_4412_57_7
Type: CAZyme
Location: 7756 - 8598 (+)
Type: CAZyme
Location: 7756 - 8598 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecivivens
Species
Faecivivens sp944387995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.