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Cluster: HRGMv2_4412_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4412_1 HRGMv2_4412_1_100 109751 111109 - 2.A.22.5.3
pfam HRGMv2_4412_1 HRGMv2_4412_1_101 111380 112807 - tRNA-synt_2b | HGTP_anticodon
pfam HRGMv2_4412_1 HRGMv2_4412_1_102 113227 114945 + LRR_1 | LRR_1 | LRR_1 | LRR_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | LRR_4 | LRR_4 | LRR_4 | LRR_6 | LRR_6 | LRR_6 | LRR_6 | LRR_6 | LRR_8 | LRR_8 | Choline_bind_3 | Choline_bind_3
CAZyme HRGMv2_4412_1 HRGMv2_4412_1_103 115285 116037 - CE4
CAZyme HRGMv2_4412_1 HRGMv2_4412_1_104 116174 116806 + GH23
Gene ID: HRGMv2_4412_1_100
Type: TC
Location: 109751 - 111109 (-)
Gene ID: HRGMv2_4412_1_101
Type: pfam
Location: 111380 - 112807 (-)
Gene ID: HRGMv2_4412_1_102
Type: pfam
Location: 113227 - 114945 (+)
Gene ID: HRGMv2_4412_1_103
Type: CAZyme
Location: 115285 - 116037 (-)
Gene ID: HRGMv2_4412_1_104
Type: CAZyme
Location: 116174 - 116806 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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