Cluster: HRGMv2_4412_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4412
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4412_26 | HRGMv2_4412_26_18 | 17031 | 18614 | + | GH35 |
| pfam | HRGMv2_4412_26 | HRGMv2_4412_26_19 | 18713 | 19498 | + | adh_short | Epimerase | adh_short_C2 |
| NULL(UNKNOWN) | HRGMv2_4412_26 | HRGMv2_4412_26_20 | 19540 | 19707 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4412_26 | HRGMv2_4412_26_21 | 20142 | 21872 | - | 1.A.11.2.3 |
| CAZyme | HRGMv2_4412_26 | HRGMv2_4412_26_22 | 22001 | 23080 | - | GT2 |
Gene ID: HRGMv2_4412_26_18
Type: CAZyme
Location: 17031 - 18614 (+)
Type: CAZyme
Location: 17031 - 18614 (+)
Gene ID: HRGMv2_4412_26_19
Type: pfam
Location: 18713 - 19498 (+)
Type: pfam
Location: 18713 - 19498 (+)
Gene ID: HRGMv2_4412_26_20
Type:
Location: 19540 - 19707 (-)
Type:
Location: 19540 - 19707 (-)
Gene ID: HRGMv2_4412_26_21
Type: TC
Location: 20142 - 21872 (-)
Type: TC
Location: 20142 - 21872 (-)
Gene ID: HRGMv2_4412_26_22
Type: CAZyme
Location: 22001 - 23080 (-)
Type: CAZyme
Location: 22001 - 23080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecivivens
Species
Faecivivens sp944387995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.