Cluster: HRGMv2_4412_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4412
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4412_23 | HRGMv2_4412_23_3 | 1443 | 2762 | + | GH30_2 |
| CAZyme | HRGMv2_4412_23 | HRGMv2_4412_23_4 | 2846 | 4855 | + | GH42 |
| TF | HRGMv2_4412_23 | HRGMv2_4412_23_5 | 5078 | 5404 | + | HTH_5 |
| TC | HRGMv2_4412_23 | HRGMv2_4412_23_6 | 5475 | 7373 | + | 3.A.3.6.10 |
| NULL(UNKNOWN) | HRGMv2_4412_23 | HRGMv2_4412_23_7 | 7576 | 7875 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4412_23 | HRGMv2_4412_23_8 | 7966 | 8688 | - | Methyltrans_RNA | PUA_4 |
| TC | HRGMv2_4412_23 | HRGMv2_4412_23_9 | 8895 | 9620 | - | 9.B.120.1.1 |
Gene ID: HRGMv2_4412_23_3
Type: CAZyme
Location: 1443 - 2762 (+)
Type: CAZyme
Location: 1443 - 2762 (+)
Gene ID: HRGMv2_4412_23_4
Type: CAZyme
Location: 2846 - 4855 (+)
Type: CAZyme
Location: 2846 - 4855 (+)
Gene ID: HRGMv2_4412_23_5
Type: TF
Location: 5078 - 5404 (+)
Type: TF
Location: 5078 - 5404 (+)
Gene ID: HRGMv2_4412_23_6
Type: TC
Location: 5475 - 7373 (+)
Type: TC
Location: 5475 - 7373 (+)
Gene ID: HRGMv2_4412_23_7
Type:
Location: 7576 - 7875 (-)
Type:
Location: 7576 - 7875 (-)
Gene ID: HRGMv2_4412_23_8
Type: pfam
Location: 7966 - 8688 (-)
Type: pfam
Location: 7966 - 8688 (-)
Gene ID: HRGMv2_4412_23_9
Type: TC
Location: 8895 - 9620 (-)
Type: TC
Location: 8895 - 9620 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecivivens
Species
Faecivivens sp944387995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.