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Cluster: HRGMv2_4412_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4412_22 HRGMv2_4412_22_5 3600 4349 - 3.A.1.7.5
TC HRGMv2_4412_22 HRGMv2_4412_22_6 4401 5291 - 3.A.1.7.5
TC HRGMv2_4412_22 HRGMv2_4412_22_7 5322 6230 - 3.A.1.7.5
pfam HRGMv2_4412_22 HRGMv2_4412_22_8 6308 7273 - PBP_like_2 | PBP_like_2
TC HRGMv2_4412_22 HRGMv2_4412_22_9 7844 9484 + 4.C.1.1.4
STP HRGMv2_4412_22 HRGMv2_4412_22_10 10020 11759 + Fer4
pfam HRGMv2_4412_22 HRGMv2_4412_22_11 11775 12356 + POR
TC HRGMv2_4412_22 HRGMv2_4412_22_12 12973 14346 - 2.A.66.1.28
CAZyme HRGMv2_4412_22 HRGMv2_4412_22_13 14563 15378 - CE1
Gene ID: HRGMv2_4412_22_5
Type: TC
Location: 3600 - 4349 (-)
Gene ID: HRGMv2_4412_22_6
Type: TC
Location: 4401 - 5291 (-)
Gene ID: HRGMv2_4412_22_7
Type: TC
Location: 5322 - 6230 (-)
Gene ID: HRGMv2_4412_22_8
Type: pfam
Location: 6308 - 7273 (-)
Gene ID: HRGMv2_4412_22_9
Type: TC
Location: 7844 - 9484 (+)
Gene ID: HRGMv2_4412_22_10
Type: STP
Location: 10020 - 11759 (+)
Gene ID: HRGMv2_4412_22_11
Type: pfam
Location: 11775 - 12356 (+)
Gene ID: HRGMv2_4412_22_12
Type: TC
Location: 12973 - 14346 (-)
Gene ID: HRGMv2_4412_22_13
Type: CAZyme
Location: 14563 - 15378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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