Cluster: HRGMv2_4412_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4412
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4412_12 | HRGMv2_4412_12_23 | 26186 | 28018 | + | GH13_4 |
| pfam | HRGMv2_4412_12 | HRGMv2_4412_12_24 | 28096 | 28872 | + | Polysacc_deac_1 |
| peptidase | HRGMv2_4412_12 | HRGMv2_4412_12_25 | 28889 | 29836 | + | S09.UPW |
| CAZyme | HRGMv2_4412_12 | HRGMv2_4412_12_26 | 29838 | 30923 | + | CE2 |
| pfam | HRGMv2_4412_12 | HRGMv2_4412_12_27 | 31009 | 31632 | - | PhoU_div |
| TC | HRGMv2_4412_12 | HRGMv2_4412_12_28 | 31723 | 32832 | - | 2.A.20.1.5 |
Gene ID: HRGMv2_4412_12_23
Type: CAZyme
Location: 26186 - 28018 (+)
Type: CAZyme
Location: 26186 - 28018 (+)
Gene ID: HRGMv2_4412_12_24
Type: pfam
Location: 28096 - 28872 (+)
Type: pfam
Location: 28096 - 28872 (+)
Gene ID: HRGMv2_4412_12_25
Type: peptidase
Location: 28889 - 29836 (+)
Type: peptidase
Location: 28889 - 29836 (+)
Gene ID: HRGMv2_4412_12_26
Type: CAZyme
Location: 29838 - 30923 (+)
Type: CAZyme
Location: 29838 - 30923 (+)
Gene ID: HRGMv2_4412_12_27
Type: pfam
Location: 31009 - 31632 (-)
Type: pfam
Location: 31009 - 31632 (-)
Gene ID: HRGMv2_4412_12_28
Type: TC
Location: 31723 - 32832 (-)
Type: TC
Location: 31723 - 32832 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecivivens
Species
Faecivivens sp944387995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.