Cluster: HRGMv2_4371_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4371
- CGC Family ID: CGCFAM_00026
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4371_28 | HRGMv2_4371_28_2 | 1224 | 4634 | - | GH39 |
| NULL(UNKNOWN) | HRGMv2_4371_28 | HRGMv2_4371_28_3 | 4674 | 6581 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4371_28 | HRGMv2_4371_28_4 | 6578 | 8287 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4371_28 | HRGMv2_4371_28_5 | 8303 | 11584 | - | CBM9 | GH39 |
| STP | HRGMv2_4371_28 | HRGMv2_4371_28_6 | 11609 | 13096 | - | SBP_bac_1 |
| TC | HRGMv2_4371_28 | HRGMv2_4371_28_7 | 13138 | 14028 | - | 3.A.1.1.29 |
| TC | HRGMv2_4371_28 | HRGMv2_4371_28_8 | 14055 | 15008 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_4371_28_2
Type: CAZyme
Location: 1224 - 4634 (-)
Type: CAZyme
Location: 1224 - 4634 (-)
Gene ID: HRGMv2_4371_28_3
Type:
Location: 4674 - 6581 (-)
Type:
Location: 4674 - 6581 (-)
Gene ID: HRGMv2_4371_28_4
Type:
Location: 6578 - 8287 (-)
Type:
Location: 6578 - 8287 (-)
Gene ID: HRGMv2_4371_28_5
Type: CAZyme
Location: 8303 - 11584 (-)
Type: CAZyme
Location: 8303 - 11584 (-)
Gene ID: HRGMv2_4371_28_6
Type: STP
Location: 11609 - 13096 (-)
Type: STP
Location: 11609 - 13096 (-)
Gene ID: HRGMv2_4371_28_7
Type: TC
Location: 13138 - 14028 (-)
Type: TC
Location: 13138 - 14028 (-)
Gene ID: HRGMv2_4371_28_8
Type: TC
Location: 14055 - 15008 (-)
Type: TC
Location: 14055 - 15008 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Avimonoglobus
Species
Avimonoglobus intestinipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.