PROTEIN: HRGMv2_4371_28_4
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Protein File & Metadata
Source:
HRGMv2_4371_28_4.pdb
Genome ID:
Protein ID:
HRGMv2_4371_28_4
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Protein Sequence
MWKGEALQKI LAGLEQDYDE AAGLLAKQLR GGSYHSALRD RTVHLIYDSL CYACCLLDAG 60 SPAQCRRALE IVERVLSCQD TDESRPTYGV YANYLEEPVW TVPAPDMNQA DFCTKEFIYI 120 LLYHQDKIPA PVQQEIREAI RRSCREIQKR DVYYDYTNIS MMAVYVLYVG GELLGDRELM 180 EFGKQKLRAL YTYNARCGNF VEYNSPTYTG IAIEEISRMR RDIRDPECAL WIERLNTMLW 240 RTMAVHFHAQ TKQWAGPHGR AYTDFTKRNL IFIQYASRGE IQLLPKEEMV YEPSWNGMEF 300 FCPPEFYSYF RGEHPYITEA CVYNADIQRF YEQKAYSWIT PECTLGSFSF SDLWNQRRAV 360 MGYFGTVEKP GCVRLRFLHD HFDYASAILN SMQEEGRVIG VVNFCTDGGD THMNLDVRKT 420 GRIEAGDMRL RLEFQGCQPE MLAAGENQFM IRCGDAAFTF QILGYAFWGQ KGFYEITRKK 480 DGGHIDFVLY SHIRRGFTLA GPMYIAFALE AGGGMPAARL SEGKDTVTVE SGPMRLTAGK 540 TPKPVKSLAQ RRSAVINYME NKSRKGWNT 569
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517ZPE3-F1-model_v4 | CBM67 | 1 | 559 | 60 | 773 | 0.6074 |
0.7382 |
| A0A8J8SCT1 | PL12 | 1 | 563 | 26 | 649 | 0.6001 |
0.6621 |
| AF-A0A1L4C0U4-F1-model_v4 | PL33_2 | 1 | 514 | 10 | 569 | 0.5974 |
0.6733 |
| AF-A0A290QFU6-F1-model_v4 | GH154 | 1 | 561 | 12 | 632 | 0.5958 |
0.6549 |
| A0A2Z5Y3Z0 | PL33_2 | 1 | 514 | 7 | 552 | 0.5953 |
0.6637 |
| AF-A0A2Z5Y3Z0-F1-model_v4 | PL33_2 | 1 | 514 | 7 | 552 | 0.5953 |
0.6637 |
| AF-A0A1B2DNQ4-F1-model_v4 | PL17_1 | 1 | 557 | 12 | 671 | 0.5945 |
0.6712 |
| AF-Q8CLP5-F1-model_v4 | PL17_1 | 1 | 561 | 1 | 650 | 0.5937 |
0.6603 |
| A0A737I0L0 | PL17_1 | 1 | 553 | 12 | 644 | 0.5926 |
0.6641 |
| AF-A0A8B6L0Y4-F1-model_v4 | PL17_1 | 1 | 561 | 12 | 672 | 0.5914 |
0.6647 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D1AWD4 | PL8 | 1 | 559 | 14 | 618 | 0.6096 |
0.663 |
| A0A517ZPE3 | CBM67 | 1 | 559 | 60 | 773 | 0.6074 |
0.7382 |
| D1AWE1 | PL12 | 1 | 564 | 6 | 591 | 0.6016 |
0.6371 |
| A0A7G8UMI7 | PL37 | 1 | 514 | 3 | 596 | 0.6005 |
0.6906 |
| A0A1L4C0U4 | PL33_2 | 1 | 514 | 10 | 569 | 0.5974 |
0.6733 |
| A0A290QFU6 | GH154 | 1 | 561 | 12 | 632 | 0.5958 |
0.6549 |
| A0A2Z5Y3Z0 | PL33_2 | 1 | 514 | 7 | 552 | 0.5953 |
0.6637 |
| A0A7I8DQ11 | PL33_2 | 1 | 514 | 6 | 570 | 0.5948 |
0.673 |
| A0A242CUC3 | GH154 | 1 | 552 | 3 | 592 | 0.5947 |
0.6425 |
| A0A1B2DNQ4 | PL17_1 | 1 | 557 | 12 | 671 | 0.5945 |
0.6712 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KMH5-F1-model_v4 | 1 | 513 | 39 | 636 | 0.5755 |
0.6818 |