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Cluster: HRGMv2_4358_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4358_2 HRGMv2_4358_2_21 20936 22621 + GH13_18
pfam HRGMv2_4358_2 HRGMv2_4358_2_22 22618 23775 + Gly_kinase
TC HRGMv2_4358_2 HRGMv2_4358_2_23 23762 25738 + 4.A.2.1.3
CAZyme HRGMv2_4358_2 HRGMv2_4358_2_24 25754 28405 + GH38
NULL(UNKNOWN) HRGMv2_4358_2 HRGMv2_4358_2_25 28425 30143 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_4358_2 HRGMv2_4358_2_26 30325 31308 + LacI
TC HRGMv2_4358_2 HRGMv2_4358_2_27 31444 32847 + 4.A.1.2.1
CAZyme HRGMv2_4358_2 HRGMv2_4358_2_28 32880 34265 + GH32
Gene ID: HRGMv2_4358_2_21
Type: CAZyme
Location: 20936 - 22621 (+)
Gene ID: HRGMv2_4358_2_22
Type: pfam
Location: 22618 - 23775 (+)
Gene ID: HRGMv2_4358_2_23
Type: TC
Location: 23762 - 25738 (+)
Gene ID: HRGMv2_4358_2_24
Type: CAZyme
Location: 25754 - 28405 (+)
Gene ID: HRGMv2_4358_2_25
Type:
Location: 28425 - 30143 (+)
Gene ID: HRGMv2_4358_2_26
Type: TF
Location: 30325 - 31308 (+)
Gene ID: HRGMv2_4358_2_27
Type: TC
Location: 31444 - 32847 (+)
Gene ID: HRGMv2_4358_2_28
Type: CAZyme
Location: 32880 - 34265 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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