PROTEIN: HRGMv2_4358_2_25
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4358_2_25.pdb
Genome ID:
Protein ID:
HRGMv2_4358_2_25
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MTYDLRPTIK VQEHAATAVG ITEIVASLKE QITKKNAQII CFETYPGIDQ QLLNQLVAEL 60 VPEKVIHSEI CTRPKKEINC ELAKELTEDR VFGLMTHAEM NDYFDCSAIT EVQQEIKATN 120 GLVIVWGVGA ALVASSPDIT VYFDITRWEI QKRFRKGLNN WLAEPETDAL KKFKRGYFFE 180 WRIADKLKSQ LRSQTDFYID GTKNEKWTMI DRATYETIQK KAVQRPFRLV PYFDQSSWGG 240 QWMKEKFELP DEIPNYGWAF DGVPEENSLI FELENAQYEM PAINLVRNYP SQLLGERVYA 300 LFGTEFPIRF DYLDTMGGGN LSLQVHPKVE YIQEKFGMVY TQNESYYILD AKEDASIYLG 360 LKNNTDIDEL FNELEKASKD SNYIFDDTKY INHFPVQKHD HFSIPAGTIH CGGTNAVVLE 420 ISATPYIFTF KLWDWGRLGL DGKPRPIHLE HGRKNVDRRF DEDYVRANLF SLNEILSSNE 480 QALVEKTGLC DLEFIETRRH TFTGEIKLEA HDSVNMLCLV EGESIELFSD DGEFVPITIH 540 YGETFIIPDN CQNVSFKNNG KNPSVVIQAF IK 572
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DQJ1-F1-model_v4 | 221 | 571 | 1 | 314 | 0.707 |
0.9197 |
| AF-Q2G223-F1-model_v4 | 225 | 572 | 1 | 312 | 0.7053 |
0.9192 |
| AF-A0A132Z9P5-F1-model_v4 | 221 | 572 | 1 | 316 | 0.7025 |
0.9119 |
| AF-Q2FWB3-F1-model_v4 | 237 | 571 | 1 | 285 | 0.6854 |
0.9217 |
| AF-P25081-F1-model_v4 | 225 | 572 | 1 | 390 | 0.6157 |
0.8239 |
| AF-A0A0H3GS87-F1-model_v4 | 225 | 572 | 1 | 390 | 0.6156 |
0.8249 |
| AF-Q32FG5-F1-model_v4 | 225 | 572 | 1 | 390 | 0.6155 |
0.8236 |
| AF-P00946-F1-model_v4 | 225 | 572 | 1 | 390 | 0.6152 |
0.8232 |
| AF-A0A0D2GQV2-F1-model_v4 | 220 | 572 | 1 | 407 | 0.6145 |
0.8291 |
| AF-A0A1C1CQS9-F1-model_v4 | 220 | 572 | 1 | 407 | 0.6134 |
0.8275 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D4KJA3-F1-model_v4 | GH1 | 14 | 572 | 223 | 768 | 0.4606 |
0.5559 |
| AF-D4KYD8-F1-model_v4 | GH1 | 15 | 572 | 224 | 768 | 0.4567 |
0.5521 |
| AF-A0A1D9P395-F1-model_v4 | GH1 | 14 | 572 | 222 | 765 | 0.4566 |
0.5519 |
| AF-A0A7U6KFF6-F1-model_v4 | GH1 | 13 | 572 | 224 | 765 | 0.4536 |
0.55 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1qwr-assembly2.cif.gz_B | 224 | 571 | 1 | 314 | 0.707 |
0.9197 |
| 1zx5-assembly1.cif.gz_A | 219 | 572 | 1 | 299 | 0.6896 |
0.9145 |
| 5zvr-assembly1.cif.gz_A | 221 | 572 | 1 | 386 | 0.6212 |
0.8177 |
| 5zv0-assembly1.cif.gz_A | 221 | 572 | 1 | 386 | 0.6192 |
0.815 |
| 5zt4-assembly1.cif.gz_A | 221 | 572 | 1 | 390 | 0.619 |
0.8194 |
| 5zuw-assembly1.cif.gz_A | 221 | 572 | 1 | 390 | 0.6188 |
0.8191 |
| 5zt5-assembly1.cif.gz_A | 221 | 572 | 1 | 391 | 0.6174 |
0.8185 |
| 5zvu-assembly1.cif.gz_A | 225 | 572 | 1 | 380 | 0.6165 |
0.8132 |
| 5zvx-assembly1.cif.gz_A | 221 | 572 | 1 | 391 | 0.6164 |
0.8171 |
| 5zuy-assembly1.cif.gz_A | 221 | 572 | 1 | 391 | 0.6117 |
0.8109 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05511-F1-model_v4 | 221 | 571 | 1 | 315 | 0.7044 |
0.9155 |
| AF-P39841-F1-model_v4 | 220 | 571 | 1 | 316 | 0.7033 |
0.913 |
| AF-Q59935-F1-model_v4 | 221 | 572 | 1 | 314 | 0.7032 |
0.9183 |
| AF-O31646-F1-model_v4 | 220 | 571 | 1 | 315 | 0.6969 |
0.9061 |
| AF-P25081-F1-model_v4 | 225 | 572 | 1 | 390 | 0.6157 |
0.8239 |
| AF-Q83KZ1-F1-model_v4 | 225 | 572 | 1 | 390 | 0.6154 |
0.8235 |
| AF-P00946-F1-model_v4 | 225 | 572 | 1 | 390 | 0.6152 |
0.8232 |
| AF-Q9FZH5-F1-model_v4 | 115 | 572 | 1 | 435 | 0.6133 |
0.7093 |
| AF-Q8HXX2-F1-model_v4 | 217 | 572 | 1 | 422 | 0.6034 |
0.824 |
| AF-A5A6K3-F1-model_v4 | 217 | 572 | 1 | 422 | 0.602 |
0.8222 |