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Cluster: HRGMv2_4358_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4358_1 HRGMv2_4358_1_131 126355 127440 + 3.A.1.11.7
TC HRGMv2_4358_1 HRGMv2_4358_1_132 127453 128259 + 3.A.1.11.7
TC HRGMv2_4358_1 HRGMv2_4358_1_133 128259 129086 + 3.A.1.11.7
TC HRGMv2_4358_1 HRGMv2_4358_1_134 129083 130156 + 3.A.1.11.7
TC HRGMv2_4358_1 HRGMv2_4358_1_135 130662 133280 + 3.A.23.1.1
pfam HRGMv2_4358_1 HRGMv2_4358_1_136 133423 133845 + EIIA-man
TC HRGMv2_4358_1 HRGMv2_4358_1_137 133857 134351 + 4.A.6.1.19
TC HRGMv2_4358_1 HRGMv2_4358_1_138 134372 135181 + 4.A.6.1.19
TC HRGMv2_4358_1 HRGMv2_4358_1_139 135178 135999 + 4.A.6.1.19
NULL(UNKNOWN) HRGMv2_4358_1 HRGMv2_4358_1_140 136049 138148 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4358_1 HRGMv2_4358_1_141 138145 139263 + GH172
Gene ID: HRGMv2_4358_1_131
Type: TC
Location: 126355 - 127440 (+)
Gene ID: HRGMv2_4358_1_132
Type: TC
Location: 127453 - 128259 (+)
Gene ID: HRGMv2_4358_1_133
Type: TC
Location: 128259 - 129086 (+)
Gene ID: HRGMv2_4358_1_134
Type: TC
Location: 129083 - 130156 (+)
Gene ID: HRGMv2_4358_1_135
Type: TC
Location: 130662 - 133280 (+)
Gene ID: HRGMv2_4358_1_136
Type: pfam
Location: 133423 - 133845 (+)
Gene ID: HRGMv2_4358_1_137
Type: TC
Location: 133857 - 134351 (+)
Gene ID: HRGMv2_4358_1_138
Type: TC
Location: 134372 - 135181 (+)
Gene ID: HRGMv2_4358_1_139
Type: TC
Location: 135178 - 135999 (+)
Gene ID: HRGMv2_4358_1_140
Type:
Location: 136049 - 138148 (+)
Gene ID: HRGMv2_4358_1_141
Type: CAZyme
Location: 138145 - 139263 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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