PROTEIN: HRGMv2_4358_1_140
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Protein File & Metadata
Source:
HRGMv2_4358_1_140.pdb
Genome ID:
Protein ID:
HRGMv2_4358_1_140
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Protein Sequence
MTINEVIHSP KHPLFNTELN DGIVTTSNEY SYYRNIPDVK GLTFDVSNQK TLANLDVCGT 60 IQTLTFYREN LLTEEKPGVW VNKQLSQTNS LSLKVEVNGI VYHLSESDHR IEVDVIQDCL 120 PRYIHHYSTF KVIVVSFAPI LANKRLSMLV QQVYIVNETH ESLQVSVKDV PLYQEKYSDQ 180 QNVLISQKGN KDTIAQQEVA SFAIAFVDPN AFEEVMTFQE SDIEKWLKET LNYFAQLFGQ 240 LSMPDDRVVH LYRRALYQSF SSFGMNRQGQ VVGSNWGSYP ATNRIWNKDM YYASLPFTMF 300 EPELCQKTVL WFDQYGVKFP GSKFTGGINH SLSNSLSSAL LASLYFEHTG DTKFFERYPQ 360 VLLNASRIIE DILAQRRSGE PMLFPSVWLS DAFALGKYHT GSNLCLWKAC SGLAEIFEVL 420 EQLSLSKRYK NIACKLKESI CKQMTIDGTF GEQFLEGIGD EEKTTYSVKN YQKPILEQGL 480 IFLSDVIVDG KINLLMHDGE ESDTTLMPFY QFLDNKDPLY QNTMTFSASS FNPTYSEEIK 540 GITWGLESGA TFPGFITVLM SDLHNHQAFA TRLEELICLA DLDGSWWWWQ YRLEAKQGEV 600 VRDFGCGKCG WASGLFVSTM ISQYFGLKFK KGVLQIDPVD NLTFSWKNLK FGQAFISIEC 660 TQSELSILNL SEKPLKISDT KKILHVEKGK TIHIQRRKR 699
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CSL2-F1-model_v4 | 1 | 699 | 1 | 699 | 0.997 |
0.9989 |
| AF-D3ZY02-F1-model_v4 | 4 | 698 | 1 | 682 | 0.7251 |
0.756 |
| AF-K0ERA7-F1-model_v4 | 9 | 699 | 9 | 763 | 0.6932 |
0.7525 |
| AF-A0A132ZDE7-F1-model_v4 | 11 | 699 | 1 | 727 | 0.6856 |
0.7248 |
| AF-P77154-F1-model_v4 | 1 | 699 | 1 | 745 | 0.6723 |
0.7136 |
| AF-A0A133D074-F1-model_v4 | 9 | 699 | 9 | 760 | 0.6711 |
0.7238 |
| AF-K0F425-F1-model_v4 | 1 | 699 | 38 | 774 | 0.664 |
0.7548 |
| AF-A0A0D2GPD4-F1-model_v4 | 12 | 645 | 1 | 663 | 0.6592 |
0.7184 |
| AF-A0A1C1D111-F1-model_v4 | 13 | 646 | 2 | 644 | 0.647 |
0.6954 |
| AF-U7PID1-F1-model_v4 | 4 | 699 | 1 | 818 | 0.6391 |
0.7058 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D9R842 | GH0 | 38 | 680 | 1 | 604 | 0.7188 |
0.7824 |
| AF-A0A6P1HFI7-F1-model_v4 | GH0 | 42 | 688 | 1 | 606 | 0.718 |
0.7823 |
| AF-A0A1W1VWV3-F1-model_v4 | GH0 | 38 | 683 | 14 | 646 | 0.7142 |
0.7676 |
| A0A7W7NSF6 | GH65 | 9 | 697 | 1 | 739 | 0.7117 |
0.7553 |
| AF-A0A2K9EXN8-F1-model_v4 | GH65 | 5 | 699 | 12 | 734 | 0.7046 |
0.7425 |
| AF-A0A7M2TBA6-F1-model_v4 | GH65 | 2 | 699 | 1 | 754 | 0.7043 |
0.7468 |
| A0A7C7EEV8 | GH0 | 36 | 638 | 11 | 592 | 0.7035 |
0.784 |
| AF-A0A410PNW6-F1-model_v4 | GH65 | 9 | 698 | 1 | 759 | 0.7007 |
0.7524 |
| AF-A0A0M3RDN7-F1-model_v4 | GH65 | 9 | 699 | 1 | 760 | 0.7001 |
0.7513 |
| AF-A0A2L2MVK5-F1-model_v4 | GH65 | 8 | 699 | 21 | 741 | 0.7 |
0.742 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QUQ65784.1 | GH94 | 7 | 697 | 8 | 689 | 0.713 |
0.7408 |
| A0A7W7NSF6 | GH65 | 9 | 697 | 1 | 739 | 0.7117 |
0.7553 |
| A0A410PNW6 | GH65 | 9 | 698 | 1 | 759 | 0.7007 |
0.7524 |
| A0A7H0LGA1 | GH65 | 8 | 696 | 18 | 765 | 0.7006 |
0.7558 |
| F0T0M0 | GH65 | 2 | 699 | 2 | 763 | 0.6995 |
0.7496 |
| UYO99515.1 | GH65 | 10 | 698 | 1 | 754 | 0.6989 |
0.7489 |
| S1P1S3 | GH65 | 9 | 698 | 1 | 746 | 0.6985 |
0.7448 |
| A0A2S2E6V4 | GH65 | 9 | 695 | 11 | 771 | 0.6982 |
0.757 |
| A0A366ADA3 | GH133 | 1 | 699 | 31 | 753 | 0.6957 |
0.7513 |
| UUM67919.1 | GH133 | 1 | 699 | 30 | 754 | 0.6954 |
0.7484 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ktr-assembly4.cif.gz_H | 9 | 697 | 10 | 761 | 0.68 |
0.733 |
| 4ktp-assembly1.cif.gz_B | 9 | 698 | 10 | 761 | 0.6799 |
0.732 |
| 1v7v-assembly1.cif.gz_A | 8 | 697 | 7 | 779 | 0.6747 |
0.7337 |
| 1h54-assembly1.cif.gz_A | 9 | 689 | 6 | 752 | 0.6732 |
0.7307 |
| 6w0p-assembly1.cif.gz_A | 9 | 696 | 10 | 752 | 0.6699 |
0.7212 |
| 6w0p-assembly2.cif.gz_C | 9 | 696 | 9 | 719 | 0.6696 |
0.7064 |
| 8bou-assembly1.cif.gz_A | 8 | 698 | 10 | 807 | 0.6645 |
0.7327 |
| 3afj-assembly1.cif.gz_B | 8 | 697 | 6 | 822 | 0.6635 |
0.7375 |
| 3qde-assembly1.cif.gz_B | 8 | 697 | 7 | 811 | 0.6634 |
0.7337 |
| 3acs-assembly1.cif.gz_B | 8 | 697 | 6 | 822 | 0.6632 |
0.7374 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-F1NZI4-F1-model_v4 | 1 | 698 | 8 | 691 | 0.7267 |
0.7577 |
| AF-A9KM56-F1-model_v4 | 9 | 696 | 4 | 756 | 0.6954 |
0.747 |
| AF-Q8GRC3-F1-model_v4 | 9 | 699 | 1 | 763 | 0.6949 |
0.7482 |
| AF-P9WN13-F1-model_v4 | 9 | 699 | 8 | 763 | 0.6922 |
0.7535 |
| AF-Q9CID5-F1-model_v4 | 9 | 697 | 2 | 769 | 0.6856 |
0.7421 |
| AF-Q8L164-F1-model_v4 | 9 | 692 | 11 | 774 | 0.685 |
0.7479 |
| AF-D6XZ22-F1-model_v4 | 9 | 696 | 10 | 761 | 0.6814 |
0.735 |
| AF-O06993-F1-model_v4 | 9 | 699 | 8 | 757 | 0.6765 |
0.7256 |
| AF-Q76IQ9-F1-model_v4 | 8 | 697 | 7 | 801 | 0.6754 |
0.7426 |
| AF-P77154-F1-model_v4 | 1 | 699 | 1 | 745 | 0.6723 |
0.7136 |