Cluster: HRGMv2_4356_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4356
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4356_39 | HRGMv2_4356_39_8 | 6585 | 7940 | + | 2.A.66.1.33 |
| STP | HRGMv2_4356_39 | HRGMv2_4356_39_9 | 8115 | 9101 | + | Rhodanese |
| CAZyme | HRGMv2_4356_39 | HRGMv2_4356_39_10 | 9135 | 13604 | + | GT51 |
| TC | HRGMv2_4356_39 | HRGMv2_4356_39_11 | 13724 | 14644 | - | 4.A.6.1.11 |
| TC | HRGMv2_4356_39 | HRGMv2_4356_39_12 | 14658 | 15473 | - | 4.A.6.1.11 |
| TC | HRGMv2_4356_39 | HRGMv2_4356_39_13 | 15488 | 16477 | - | 4.A.6.1.15 |
Gene ID: HRGMv2_4356_39_8
Type: TC
Location: 6585 - 7940 (+)
Type: TC
Location: 6585 - 7940 (+)
Gene ID: HRGMv2_4356_39_9
Type: STP
Location: 8115 - 9101 (+)
Type: STP
Location: 8115 - 9101 (+)
Gene ID: HRGMv2_4356_39_10
Type: CAZyme
Location: 9135 - 13604 (+)
Type: CAZyme
Location: 9135 - 13604 (+)
Gene ID: HRGMv2_4356_39_11
Type: TC
Location: 13724 - 14644 (-)
Type: TC
Location: 13724 - 14644 (-)
Gene ID: HRGMv2_4356_39_12
Type: TC
Location: 14658 - 15473 (-)
Type: TC
Location: 14658 - 15473 (-)
Gene ID: HRGMv2_4356_39_13
Type: TC
Location: 15488 - 16477 (-)
Type: TC
Location: 15488 - 16477 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Aerococcaceae
Genus
Abiotrophia
Species
Abiotrophia defectiva
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.