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Cluster: HRGMv2_4355_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4355_1 HRGMv2_4355_1_111 115006 115686 - 3.A.1.15.5
pfam HRGMv2_4355_1 HRGMv2_4355_1_112 115686 116573 - ZnuA
pfam HRGMv2_4355_1 HRGMv2_4355_1_113 116715 117887 + Acetyltransf_9 | SCP2_2 | Acetyltransf_17
TC HRGMv2_4355_1 HRGMv2_4355_1_114 118003 119787 + 3.A.1.106.1
pfam HRGMv2_4355_1 HRGMv2_4355_1_115 119813 120397 + UDG
NULL(UNKNOWN) HRGMv2_4355_1 HRGMv2_4355_1_116 120465 120977 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4355_1 HRGMv2_4355_1_117 121126 121596 - 4.A.1.1.1
pfam HRGMv2_4355_1 HRGMv2_4355_1_118 121664 122812 - Meth_synt_2
TC HRGMv2_4355_1 HRGMv2_4355_1_119 122825 123694 - 3.A.1.24.3
TC HRGMv2_4355_1 HRGMv2_4355_1_120 123706 124377 - 3.A.1.24.3
TC HRGMv2_4355_1 HRGMv2_4355_1_121 124371 125444 - 3.A.1.24.6
STP HRGMv2_4355_1 HRGMv2_4355_1_122 126121 127452 - Pyr_redox_2
TF HRGMv2_4355_1 HRGMv2_4355_1_123 127681 128436 - HTH_6
CAZyme HRGMv2_4355_1 HRGMv2_4355_1_124 128471 129916 - GH1
TC HRGMv2_4355_1 HRGMv2_4355_1_125 129929 130252 - 4.A.3.2.2
TC HRGMv2_4355_1 HRGMv2_4355_1_126 130333 130647 - 4.A.3.2.4
TF HRGMv2_4355_1 HRGMv2_4355_1_127 130809 131504 + GntR
TC HRGMv2_4355_1 HRGMv2_4355_1_128 131824 132819 + 3.A.1.34.1
TC HRGMv2_4355_1 HRGMv2_4355_1_129 132816 133736 + 3.A.1.34.1
TC HRGMv2_4355_1 HRGMv2_4355_1_130 133729 134487 + 3.A.1.34.1
Gene ID: HRGMv2_4355_1_111
Type: TC
Location: 115006 - 115686 (-)
Gene ID: HRGMv2_4355_1_112
Type: pfam
Location: 115686 - 116573 (-)
Gene ID: HRGMv2_4355_1_113
Type: pfam
Location: 116715 - 117887 (+)
Gene ID: HRGMv2_4355_1_114
Type: TC
Location: 118003 - 119787 (+)
Gene ID: HRGMv2_4355_1_115
Type: pfam
Location: 119813 - 120397 (+)
Gene ID: HRGMv2_4355_1_116
Type:
Location: 120465 - 120977 (-)
Gene ID: HRGMv2_4355_1_117
Type: TC
Location: 121126 - 121596 (-)
Gene ID: HRGMv2_4355_1_118
Type: pfam
Location: 121664 - 122812 (-)
Gene ID: HRGMv2_4355_1_119
Type: TC
Location: 122825 - 123694 (-)
Gene ID: HRGMv2_4355_1_120
Type: TC
Location: 123706 - 124377 (-)
Gene ID: HRGMv2_4355_1_121
Type: TC
Location: 124371 - 125444 (-)
Gene ID: HRGMv2_4355_1_122
Type: STP
Location: 126121 - 127452 (-)
Gene ID: HRGMv2_4355_1_123
Type: TF
Location: 127681 - 128436 (-)
Gene ID: HRGMv2_4355_1_124
Type: CAZyme
Location: 128471 - 129916 (-)
Gene ID: HRGMv2_4355_1_125
Type: TC
Location: 129929 - 130252 (-)
Gene ID: HRGMv2_4355_1_126
Type: TC
Location: 130333 - 130647 (-)
Gene ID: HRGMv2_4355_1_127
Type: TF
Location: 130809 - 131504 (+)
Gene ID: HRGMv2_4355_1_128
Type: TC
Location: 131824 - 132819 (+)
Gene ID: HRGMv2_4355_1_129
Type: TC
Location: 132816 - 133736 (+)
Gene ID: HRGMv2_4355_1_130
Type: TC
Location: 133729 - 134487 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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